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11-2779-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1437612 [Map]; Strand: c
      • AT1G05020.1 - [+] show detail - ENTH/ANTH/VHS superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-2779-1 - 3-prime edge 
    GAGTCTCGAG ACCCTTTCAA GATATAGCGT TGACTAATAG AGAGACTTCA 
    CACGCGATTT TGGCGCGTTA AATATATAAT TGTGTTTAAA TTCTTCTTCT 
    TGTTAGAAGA AAAAGCATGA TGCATAGAAT TGTGTTCAAA TTTCGAAAAC 
    TTTATTATAA TACAAATATC TTGTCAGTGT ATTTATGTTA CAAATTTTTT 
    GATCGGCTAA AAGTAACATT CTCTCACAAT TCCTTAAGAG TTGTTTCTAC 
    GAGCCTCATA TTCGTATAGG TTATAAATTC AATGACAAGC TGTATACGCT 
    TTTTTTTTTT AAAAAACCAN CTNNCNTNTT TNTTTTNAAN NTTTTGGGGA 
    NAAATTNAAT NTTNTNAAAA ATNTTTNTTT TTNTTNGCAA ACGNCCAANC 
    CNGTTTTNTT TTNNAATTNN AATTTTTNGA NANCNTGNNT TTNGGNCNCN 
    CNATTTTCNC CNTGACNNGG NAANCNTNTT TNGNTTAAAA NGNAACNNNG 
    NNNCTNCNTT AGNNNTTTAA ATCAAAAACN NNCTNNCNCN CCNGTAAANN 
    GGCNNAACCC CTTNCAAAAG TNNGNTTTTG GNGGGNANCC CNNGNNACNT 
    TTTTTNCNAN TTTNTNAAAA AATNNTTTTT CCCNNCCCCA AGATTNNNTA 
    TATNCCCCCC AAAATTTNNA CNNNCNTNAT TCCNNGNCTT TTTNNTTTTA 
    AAACANNCGG ANGAAAANNG GNAAAAAATT NNGGGGCTTT CNNTNTTTCT 
    TNA

AT1G05020.1

Model type
Protein coding
Short Description
ENTH/ANTH/VHS superfamily protein
Computational Description
ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 663 Blast hits to 661 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 204; Fungi - 47; Plants - 394; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Link
InterPro Scan - TAIR