1. Home
  2. Mutant Lines
  3. 11-2783-1

11-2783-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29637452 [Map]; Strand: w
      • AT1G78830.1 - [+] show detail - Curculin-like (mannose-binding) lectin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2783-1 - 5-prime edge 
    GGGNNAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATAAT 
    CGGTTATACC TTTTGGTGTA GTGACACAGC GTTGCACATG CCACGNTCGC 
    AGTAACCGTN ATCGCCGNAN ANCGACGGCA AGCCACATTG NCGGACGAAG 
    TNNGTGGAGA AGAATGAGAA ACTCTCTTCC CATTTGAGAT ACGTAGCTGC 
    TGGGAAATAC GAGTAAGCCT TGAGACTCCC GTCAGATCCG AGTCTTAGAT 
    ACGAAATCGT TCCGTTGTAA TTGATTTTGT TCAGATTTAA AGTTCCTCCT 
    CCGCTTCCGA TTGGTCTGAC TTGGAGTAAC CGGCGGTTAT TACCCGGTTG 
    TGGTGCGGGT TCTAAGAGAA GCTCGTAAGC TGACGGCTCC GTTAAATTAT 
    CGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29637392 [Map]; Strand: w
      • AT1G78830.1 - [+] show detail - Curculin-like (mannose-binding) lectin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2783-1 - 3-prime edge 
    AAAAGGATTA CTCGGATGGA GTGATAAATG CGCACCACCT ATAACGACGC 
    AGTTTTGCAG CGGAGTCAAG GGTAAAACTG TCAATTATTA TAAGATAGTC 
    GGTGTTGAGC ATTTTACTGG GCCTTATGTT AATGATGGAC AAGGCCCAAC 
    TTCTGTGAAC GATTGCAAGG CCAAGTGCGA TCGTGATTGC AAGTGTTTGG 
    GTTACNTTCT ACAAAGAGAA AGACAAGAAA TGTTTGCTTG CTCCTCTGCT 
    TGGTACACTT ATCAAAGATG CCAACACTTC TTCTGTTGCT TACATCAAAT 
    ATTAGTGTTT TTTTGGGAAA GTTATTTACC GAATT

AT1G78830.1

Model type
Protein coding
Short Description
Curculin-like (mannose-binding) lectin family protein
Computational Description
Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; LOCATED IN: apoplast, cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT1G78820.1); Has 2662 Blast hits to 2603 proteins in 85 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 2651; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR