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Mutant Lines
11-2885-1

11-2885-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 8979117 [Map]; Strand: c
- AT2G20850.1 - [+] show detail - STRUBBELIG-receptor family 1
  Distance: 0; Region: exon1 (CDS)
- AT2G20860.1 - [+] show detail - lipoic acid synthase 1
  Distance: -462; Region: promoter

TTCGGAATGA GATCGATGAG ATCTGGGAGA GACAACAACA TCTGCTTCCT 
GGGTTTTCTC TCCTTTGCCC TTATCTCCCT TCCCTCCTTG TCACTTGCTC 
TTACCAATCC TGACGATGGT AAGCCCCTAA TTCTCTCTGT TTTTCCCTTT 
TGTGTAATGG TAATGTTAGT ATAGCTAATC GTACCCTGAT TGTTTGCTTT 
AGTTGCGGCT ATTAACAGTC TCTTCCTTGC ACTGGAGTCT CCTCTTCTCC 
CCGGTTGGGT TGCATCTGGA GGTGACCCAT GTGGTGAGAG CTGGCAAGGT 
GTTCTATGTA ATGCTTCCCA AGTAGAAACA ATGTAAAAAA CGACACCTCC 
CATCTTCTTC TTCTTACTTT TCTTTATCAT TCTTCTAACA ACACTCTCAC 
CCTTTTTCAN AATT

3 prime edge [+] show sequence

Chromosome: 2; Position: 8979233 [Map]; Strand: c
- AT2G20850.1 - [+] show detail - STRUBBELIG-receptor family 1
  Distance: 0; Region: exon1 (5UTR)
- AT2G20860.1 - [+] show detail - lipoic acid synthase 1
  Distance: -346; Region: promoter

ATTCCGAATC CAGTAGACAC TAAGAGAGAT ATGTGAGTGA ACAGAGTCGT 
TGAAAATTCA AAAGCAAAAC TTAGCAGCCA AGAATATGAT TCGACAGACG 
AAGGAAAAAG GTGAGTAAGA GAACTTTATG TTATCTTAAG AGAAAAGGGA 
ATGTTTTTTT GCAAGTGAGT GAGAGAGAGC GTCACTGTGT GAATGCGATT 
CTTCTTAGTT CTTACAAGCA AATCTAAACT TGTGTTTTCA AAATTTGACG 
GGCAGACGAA ACAGAGAAGA CGACAAAGAA GCT

AT2G20850.1

Model type: Protein coding
Short Description: STRUBBELIG-receptor family 1
Computational Description: STRUBBELIG-receptor family 1 (SRF1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 3 (TAIR:AT4G03390.1); Has 150345 Blast hits to 104966 proteins in 4098 species: Archae - 89; Bacteria - 11039; Metazoa - 39266; Fungi - 7103; Plants - 77215; Viruses - 282; Other Eukaryotes - 15351 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G20860.1

Model type: Protein coding
Short Description: lipoic acid synthase 1
Curator Summary: LIP1,Lipoic acid synthase,
Computational Description: LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink).
Link: InterPro Scan - TAIR