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11-2887-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1441550 [Map]; Strand: c
      • AT1G05030.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -133; Region: promoter
    Flanking Genome Sequence: 11-2887-1 - 5-prime edge 
    CCCATTTATA AGGAAGTTTA TCACCGACGA AAAGGAAATT TAACTTTGAT 
    AAAGAATTTT AAAAAGAAAA TAAAAAGGAA ATTCTGAGAA CGCAAAAATA 
    AAAGGGAAAT CACTCAGTAT TTGAGCACGT GAGTGTCACG TGATTACAAG 
    TTTATTATTT TCCGTCGCCT CAAATTTTAT TATTTTCGCT TCGCCGACGT 
    ATTTCTCTCT CTTCCGTCTA GTCTAGCTCT CCGATCATGT GGGTGACGAA 
    TACCGTACTT CTACATCATC CCAATGCTCT GACCCGATTA ACCTTTTCTT 
    CCCCGACCCG ACTCGCCCAC TCTCGTAAAG CCTCTTCCTT TTCCCGTTTC 
    TTTCGGTCTT CAAAGAGGAA GAAGCGGGTT ACGACATTGT CGACGAAGAA 
    ACCAGGTTCA GCTTTCTCAC CTCCATTGAC TTACCAATCT ATTTGCCAAT 
    GTTTATCTGT TTGAAATATT CTAACTTTAT TCAAAATTTT AACAGATGAC 
    GATCACGAGA TCTCGCCAGT TCCGCCGGAG AAATTCTCCG CTGATTTGGG 
    ATGGTTATCG GCTTTTCCTC ATGTATCAGT TGCTTCTATG GCCAATTTTC 
    TCTTTGGTTA TCACATTGGG TAACAATCCA TGTTTTTTGT TTCACTGGCC 
    TAGTTTGATT TCTATACCAG GAGATTGATC TATGTTCGNG TANNANTTGN 
    TAATGCTNGG TTGNGTNGNA AAATACCANC CCCG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1444564 [Map]; Strand: c
      • AT1G05030.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -3147; Region: intergenic
      • AT1G05040.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protei...
        Distance: 2805; Region: intergenic
    Flanking Genome Sequence: 11-2887-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAAAAT 
    GGGCATGCGC GTCCAAAAAC TATCCGAATG TAATTTCGTA TTTTCTTTAA 
    TAAAATGGGG GGATTTTCCT CCCTTTCCTA AAAAAAAATA CTTATAAATA 
    CTATACTAAT CTCTTCTTAA GGATCAAAGT TCTCAACCTC CGAAGAGCAA 
    AACCCTAAAG NGCTTTATCT TCTTCTTCTT CTTTTAAAAA ACTTGAGTTT 
    CTTCTTGAGC AAGTTATGTC GAANAGCCGT TATGAATCTC ATTCTCGCTT 
    TGANAATTAT TCGGNGAGTT CGTTCGTTCG TTCGTATCTC TTCGGCGGGT 
    CGATCATTAN AGATGGCAAG GAGGTGTTTA AAGGTGAATC TGGGATTATA 
    ANANATTCGA CGTTACGGNG ATGAAGTTGT GGCCGGAATT TGAANAACAT 
    GACCGGAAAT TTACAACGAG ATGGAGGAAT TTTCTTCGTC GGANATTATT 
    TATGATGATG TCATACAACG GTTATTTGNG ATGATGTCAC ACAACGGCTA 
    TTTTGGATGA TGTCATACAA GGGCTATTTT GGAATTTGTT TGAGTATAGA 
    GAACAAAGGA CTACGGNGAA NATTCGTGAG ATGACTGANA GAANACNACT 
    TGGAGAGGTN TCANATCAGG AAAAGAGTCT CACGTTACAT CAAATTCCAA 
    TACNATTTCA GGGGAGTTTC CTTATTACGT TNTTAAATTT TCTACTNATT 
    TACAAACCNA TNTGAAACTA NCCGGATTTT GGATNACCNN CCCNGGCCNN 
    NNACCNCCNT NC

AT1G05030.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: plastidic GLC translocator (TAIR:AT5G16150.3); Has 32095 Blast hits to 31550 proteins in 2260 species: Archae - 588; Bacteria - 15264; Metazoa - 5199; Fungi - 6752; Plants - 2455; Viruses - 0; Other Eukaryotes - 1837 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05040.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protein (TAIR:AT2G33010.1); Has 14 Blast hits to 12 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR