Home
Mutant Lines
11-2913-1

11-2913-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 1892060 [Map]; Strand: c
- AT1G06180.1 - [+] show detail - myb domain protein 13
  Distance: 902; Region: intergenic
- AT1G06190.1 - [+] show detail - Rho termination factor
  Distance: 213; Region: intergenic

ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
GTTTTTGATA AAGCCTTGGA GTAAGTTTCC GAACCAAAGA AGCGGTTTAG 
CGTACGTCTA ATACCATTCC TGATGAGCTT CAACAACATG CAAACACTAC 
ACCTTTAGAG TCTCAGAGCA TTTGTAGCTG CTACTTGAGA GATTTGAGTG 
AACTATATTA TAGACTCTTT TAAGTGTCCG AACAAGTATC AACCTGTTGT 
GTTGGTAATA GATTTTTGAA AATCCATATG ATTGAACAGT AAATAATGCG 
TCCTGAAAAC TGTAGTTGAC AAGGTACATC AGTGTAATAA TAATAACTTA 
AAAGAGAAGA AGGTAATCCT AGTAAATCAA GAACATCAAA GCCAGCATTT 
CCAAACAAAC AAAATACAGA GAAAGNAACT CATTTTAACT GGTNCATACT 
AGAGCAAGGT TCACCTGGAA TNNCTACCAA TNCAACTCCA CTAATTCNGC 
NTNTNTTNAT TCTTNNACAN CCCTNTTTAG TNCCCCGNGA CTCTTGCCTN 
TGCCTCTANN NNCGACNNAG CNNCAAATTN NCTNCAAGCC TTNNACGNGN 
NTTCCTTCCC CGNNTTNNAT CANTATCNNN CATNAAGCAT TATCTCNAAN 
NANNNTNTNN NCNTTNNNNN NATCACCATT CTATNNNNNN NCATNNATTN 
CTNNNNNNNN CNCTATNANN NNNNANCNNN NATNNNCTNN CNCTCNCTNC 
TNNATNNATN NNNNNGNNNA TNCTNNGNTN NNNTNNCTTN TGNATNNGGN 
NNNNNCG

AT1G06180.1

Model type: Protein coding
Short Description: myb domain protein 13
Curator Summary: member of MYB3R- and R2R3- type MYB- encoding genes
Computational Description: myb domain protein 13 (MYB13); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 14 (TAIR:AT2G31180.1); Has 8947 Blast hits to 8242 proteins in 510 species: Archae - 0; Bacteria - 0; Metazoa - 809; Fungi - 464; Plants - 5950; Viruses - 6; Other Eukaryotes - 1718 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G06190.1

Model type: Protein coding
Short Description: Rho termination factor
Computational Description: Rho termination factor; FUNCTIONS IN: transcription termination factor activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding; INVOLVED IN: transcription termination, ATP biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rho termination factor, N-terminal (InterPro:IPR011112), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757); BEST Arabidopsis thaliana protein match is: ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism (TAIR:AT2G31150.1); Has 1888 Blast hits to 1636 proteins in 313 species: Archae - 6; Bacteria - 275; Metazoa - 547; Fungi - 247; Plants - 133; Viruses - 50; Other Eukaryotes - 630 (source: NCBI BLink).
Link: InterPro Scan - TAIR