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Mutant Lines
11-2918-1

11-2918-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 1349849 [Map]; Strand: c
  - AT1G04800.1 - [+] show detail - glycine-rich protein
    Distance: -563; Region: promoter
  - AT1G04810.1 - [+] show detail - 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
    Distance: -331; Region: promoter
Flanking Genome Sequence: 11-2918-1 - 3-prime edge
```
GTTGGAGGAC AGGCCATGTC AATCTATGGA ATATTGAACT ATCTATATAA 
ACCCTAAAAT GTGATTTCAT TTATTTGTGA GCTTTAGCTT TTTAGGTGTC 
ATCAATCAAT GATGTAAACT AGAAACTCAT ATGCTATACT TTCCAAACAA 
ACCAATAAAG TTTTTATTAT GGGCCGCTAG ATTGGTCCAT TAACACTATA 
AGATATATAG TCTGGCCCAT CATTAGACCC AATTTTGTAT TCCGACTTTA 
TGATTTTGTT TGGATC
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 1349733 [Map]; Strand: c
- AT1G04800.1 - [+] show detail - glycine-rich protein
  Distance: -447; Region: promoter
- AT1G04810.1 - [+] show detail - 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
  Distance: -447; Region: promoter

CCTCCAACCC ATAAAGCGAC TACATCTTTT ATCAAGTCAG AATTATTTTC 
TAGTAAATAT TTTCTCTTAG ACCATACGAG TTTTCACTTA ATATGAAATT 
ATGAATAGAC ATGCAGAAAC ATTTTCATTT TTAGTTATTG CCCTCTGAAA 
CCTGGACAAC CTTCAAATTA AATTTTAATA TAATTGATAT GAATGTATGA 
TTAATATAAT TCAAGGAACT GTATATAATA ATTGGTGTCA TATGTTCTTC 
AATTTTTCAA CTATATTTGC ATCATATTTT TCTCTTTGTG TTGGATGAGA 
TCAATATGGC AGTTGGGCAG ACAATGAAAC ATAAAACTTG TCCAGTGACC 
GGTGAAACAT CTTTAACTGT TTTTACTCAA CAGCAATTAT ATCCTAGTTG 
TTGTACAGGT TGAATCCATG CACATTGACG AAAAGTGCTT ATGCTATCAC 
GATCTCTCTC TAAGTCTATA TATATACTGC TCATGCAAGA AGCAATTTCG 
TATCAAAACA TCCTCTTCCA ATAGCTTCTA ATATTTTAAC TACAAACATT 
TTAAGTTTCC ACTAACAATG GGTCTAATCG CCGGTAAAGT GTGTGTGTTT 
GTTNNGGNGT NNGCTTTGGN CACAGATTTT ACTATGGGAG AANCANANTT 
TGGNGATGAN AANCCCTTGN NTNNT

AT1G04800.1

Model type: Protein coding
Short Description: glycine-rich protein
Computational Description: glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 109132 Blast hits to 26905 proteins in 1855 species: Archae - 173; Bacteria - 37969; Metazoa - 32319; Fungi - 6881; Plants - 10265; Viruses - 1569; Other Eukaryotes - 19956 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04810.1

Model type: Protein coding
Short Description: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
Computational Description: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT2G32730.1); Has 1171 Blast hits to 1071 proteins in 297 species: Archae - 14; Bacteria - 33; Metazoa - 390; Fungi - 382; Plants - 143; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).
Link: InterPro Scan - TAIR