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Mutant Lines
11-2962-1

11-2962-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 6942116 [Map]; Strand: c
  - AT1G20020.1 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
    Distance: -601; Region: promoter
  - AT1G20020.2 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
    Distance: -601; Region: promoter
  - AT1G20020.3 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
    Distance: -601; Region: promoter
Flanking Genome Sequence: 11-2962-1 - 5-prime edge
```
CAAGAGAGTT GGTACTATCC AACGCTCTCT CTTGTTTCCA AGATGTTTCG 
TCTATCGGTT GCATCACCTG AACTATACGC GAGACGGTCC CTTTTAGACT 
GTCCCGAATG CTATATCTAT GTTTTCATGT TGAACCTCCC AGCTAAACTC 
AGCTGGTATG TTCTCGACCG GAAAACACCA GGTCCTAGTA CAGCTAAGAG 
CTAACAATCT CTTGGTGGCT GTTCCCTTGC TCCACTTACA TAGTTATATG 
TCTCTACGTT CAAGCT
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 6942232 [Map]; Strand: c
  - AT1G20020.1 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
    Distance: -485; Region: promoter
  - AT1G20020.2 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
    Distance: -485; Region: promoter
  - AT1G20020.3 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
    Distance: -485; Region: promoter
Flanking Genome Sequence: 11-2962-1 - 3-prime edge
```
CTCTCTTGGA AGTGACATCA TCTCCATATG TAAACTAGAT TCCCTAAAAC 
AAAACAATCC ACAACTTCAA TTTTGTATAT ACATTCATCA TTTTGCAAAT 
GTGGATATAT AGGCATTGAT TGAAAAGTGA AATGGTAAAA TATGATATAA 
TTTTGATCAG GTAGGAAAGT TATGGTGATA ATATCTTGTC CAAAAATAAA 
ACATTGTAAA GTATATTTAA AGGAAAGGGC CCTTGTATAA AGCT
```

AT1G20020.1

Model type: Protein coding
Short Description: ferredoxin-NADP(+)-oxidoreductase 2
Curator Summary: Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma
Computational Description: ferredoxin-NADP(+)-oxidoreductase 2 (FNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6774 Blast hits to 6774 proteins in 1708 species: Archae - 20; Bacteria - 3604; Metazoa - 802; Fungi - 759; Plants - 616; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G20020.2

Model type: Protein coding
Short Description: ferredoxin-NADP(+)-oxidoreductase 2
Curator Summary: Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma
Computational Description: LEAF FNR 2 (ATLFNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6542 Blast hits to 6542 proteins in 1635 species: Archae - 18; Bacteria - 3429; Metazoa - 796; Fungi - 693; Plants - 607; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G20020.3

Model type: Protein coding
Short Description: ferredoxin-NADP(+)-oxidoreductase 2
Curator Summary: Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma
Computational Description: LEAF FNR 2 (ATLFNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6779 Blast hits to 6779 proteins in 1702 species: Archae - 20; Bacteria - 3601; Metazoa - 804; Fungi - 729; Plants - 614; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink).
Link: InterPro Scan - TAIR