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11-2965-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 222282 [Map]; Strand: c
      • AT4G00490.1 - [+] show detail - beta-amylase 2
        Distance: -38; Region: promoter
    Flanking Genome Sequence: 11-2965-1 - 5-prime edge 
    GNTNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TAAAAAAGTT TTCAGGATTC ACTCAGATCC GTTGAGTACA 
    AAAGGGTTTT GTCTTTTACC ACTTTTTTCT AATCCACGTG GCGTGACCTG 
    ACACGTCAGA TAAGTACGCG CGTTGCAACT TTATCAAGGG GCTTTTTGTG 
    AATATTACTA TGGGCTTTTC AGAATATATT ATTGGGCCTG TAAAGTCACG 
    TCACTAAAAA AAGTAGTTTA TCTACATCAA ATGTGTTTAT TATTTAATAA 
    CTTTAGTGTG TTGTTGTACT TGCACGAGTG TATATGAATT TANAATAATA 
    CTATCTTAAA CAATCGGCTA AGCTATTTAT AATCTGTAAG ATTGATACTA 
    ACGATGTAAC ATTAATGTAT TAATCCGAAN ACAGTCGTGC ATTGTAGTGG 
    CAAATGTTGT ATGTCAAATG TGTCGCGTCT GTAATCAATG CGCTACGTCT 
    CTCTGTCTTA CAAAATCATT GAAGNTNNNA NNCCGGGCCG NNNNNCACNC 
    GNGCCNTT

AT4G00490.1

Model type
Protein coding
Short Description
beta-amylase 2
Curator Summary
Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.
Computational Description
beta-amylase 2 (BAM2); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 7 (TAIR:AT2G45880.1); Has 836 Blast hits to 835 proteins in 165 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link
InterPro Scan - TAIR