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11-2969-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4172887 [Map]; Strand: c
      • AT5G13150.1 - [+] show detail - exocyst subunit exo70 family protein C1
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 11-2969-1 - 5-prime edge 
    CTTAAGCTAT GAGGAGAAAA AAAAACCCTA CTTGTTCCTT TNGCTTCTTT 
    TTTTTTACCT NAAAACTTCT ATCGTTATCT TTCATTACCT TCTNGTTTAT 
    ANAACCCATG AAAAGCTNCC GGGAAAACTT TTNGATTTCT TTTNTTTCTT 
    ACTTTNAAAA GTTGGAGTTT TNATNATTTT TCTNACNGNN ATATANGTCT 
    ATGTTTGGAT TNCCNGTTNG AACAGGTNGG GAGCNAAATN GTTNAAAACT 
    ACTTTAGGGT TAANGGCCCN AAATTATNTT TAAAANGTNT TTNGAAAATT 
    NGGGATTNAA ANGATAATAA TTCATGATTA AGTNGATCTT ATGANATATT 
    NGAGTTTTTN GNNGNAACNA NCCTNGGGGA TCTTATTCTT ATNNGGAAAA 
    CTTGATTNTG GGANAAAGTT TACTTAGTNT NTTCNATAAA TACTGATNAA 
    TGGGGAAGNG NNGNGGNAAT ANCNTGGNTN TTGANTCCCC GGNCNNNTTT 
    TTTGGNCCNN NANNGGGGGG AANNNNNT

AT5G13150.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein C1
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR