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11-2996-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1536415 [Map]; Strand: c
      • AT1G05280.1 - [+] show detail - Protein of unknown function (DUF604)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-2996-1 - 3-prime edge 
    GTCTCCTCCG TACAAATGTG GATATCGTTC GATACAAGAA TCGAAATTTC 
    TAGCTAAAAC ATTAGCCAAT GAGCTGCTTA AAGCGTACCC ACCACCCCCG 
    AACGCCATGT CGTGTCCGAA CATAGAGTTC TGGTGATAAA TCTCCGAGGT 
    TGATCCTATG TAATACCATG ATGTGTGGTC GTATTTGGAG AGAGTTCGAG 
    CGAGGTTTTC AGGAATGAAA ATCGTGTCGT CGTCTCCAAA TACGTACCAT 
    CTTACTTCTT CTGAGGAGGT GTTGAATAGC CTGACAGTTT CTAGAACGCA 
    CCGCGCGATT CGGATCGCGT TTCTGTCACC GCCTCTCCAA GTGTACCTGT 
    AGACGCTTGT CTCATTAGGC CGATTCGATT TAACTGTACC CTAATTTGCA 
    AGTTAAATTG ATTAAGGAAT AAAGTAGGAA TATCAACTAA TTAATTTCTG 
    TCTTTAAATT GTTTTCATAT ATAAAATTAC AAAAAAATGT CACAATTCAA 
    TATTTTAAAT TTATATATCC TATACTTTAA ATCTTTAATA GACGTTAAAC 
    TAATAAATCG CAAACTATAC TTATTTTTAA TTTATGATGA AACANAAGTT 
    GAAACTTTTT TCTGACTAAA AAACANTAAN CAAATTGAAC TNATTACCTG 
    AACCNGGGAA GTNTNTTGGG NAACNCNNNC CGNNGGANGG NGATNTNAAT 
    NTNNGNGGNT NNNNNAANAC NGNNNGGGNN CNNNNNANAA CNCNNCTNT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1536299 [Map]; Strand: c
      • AT1G05280.1 - [+] show detail - Protein of unknown function (DUF604)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-2996-1 - 5-prime edge 
    GAGGAGACTC TAGGGTTTAT GCTTGTGTGC TTGAGCTTGG GGTTGGATTG 
    TCTAAAGAGC CTGGCTTCCA TCAGGTTTTA AAGTCTATAT GTACGTAATT 
    AATAGTTATT AGTAAAAAAA AAAACTGATT AAAAATNTTT GTTTTTATTT 
    TTNAANCANT TTNATGTNAA AGNAAATNCN TTGGNAATNT TGACATCNCN 
    TTCAACNAAA CCGTNGGNGT CNCTACNCCN CATGGNTNAN ATTGACCCAA 
    TNTTTCCAAA CTNAACCANT TTTTCCGGGG NCCCCCNCCT TTTNTCCNCC 
    GNAAAACTCA ACCCTTTCCG NNTTTTTNAA CTNTCCGTTT GCTACAACCG 
    TNGGNNCTNT TGNNCCATNN CCGNNTTTNG GGNANNNCCT GNNAAGGTNA 
    AANCTTTTTT NCCCTTTTTN GNNNAGNACT CCAANANCNN NNNGNNNTTA 
    NTNNAANNTT NAA

AT1G05280.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF604)
Computational Description
Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G15240.1); Has 523 Blast hits to 513 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 172; Plants - 273; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR