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11-3014-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6101593 [Map]; Strand: w
      • AT4G09649.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -895; Region: promoter
      • AT4G09650.1 - [+] show detail - ATP synthase delta-subunit gene
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 11-3014-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTCT ATTAATCAAT CATATAATAT ACAGTACTGA 
    TGATATAATA ATGATTCTGA GTTTATTATC TTTGTAATTG TTAAGTCTAG 
    TGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6101538 [Map]; Strand: w
      • AT4G09649.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -840; Region: promoter
      • AT4G09650.1 - [+] show detail - ATP synthase delta-subunit gene
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 11-3014-1 - 3-prime edge 
    GAGAAAGAAG ATGAGGAGAA AAAAAATTAA ACTTGCACAA AAAAAAAAAN 
    ATTNTNAANT TTTTNTTTTN TNCAATTTTN CCCAANTNTN ANGTGNCTAN 
    TNGANTNTCC CCANGTTNAN NCNNGNAAAN CANTNTTTTN ANNCGNGTTT 
    TTTCCCCCTC NTTTNANTAN NCTCCCANCC GGGGCCGTNN NCCNCCCNNG 
    CCCNTNNAA

AT4G09649.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G09650.1

Model type
Protein coding
Short Description
ATP synthase delta-subunit gene
Curator Summary
Encodes the chloroplast ATPase delta-subunit.
Computational Description
ATP synthase delta-subunit gene (ATPD); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, photosynthetic electron transport in photosystem I, photosynthetic electron transport in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit, conserved site (InterPro:IPR020781), ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 4372 Blast hits to 4372 proteins in 1436 species: Archae - 0; Bacteria - 2635; Metazoa - 155; Fungi - 114; Plants - 153; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink).
Link
InterPro Scan - TAIR