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11-3032-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1321385 [Map]; Strand: w
      • AT1G04710.1 - [+] show detail - peroxisomal 3-ketoacyl-CoA thiolase 4
        Distance: -519; Region: promoter
    Flanking Genome Sequence: 11-3032-1 - 5-prime edge 
    GCTCTTTGTT TGTTTCANTG TTANATTATT GGAATTGAAA AACATGGACA 
    TATGAAATTC CAACAAAACT GTTACAGCTT AATCATAAAG CATATGTAAC 
    TAAATGATTA CGTACAATTG ATTATGAGAT ACTAATCACA GATTATGCCA 
    ATGAGAAACA GACCAAAGCA CCAAACTTAA TAAGTAACAA CTCATAATCC 
    ATGGAAATCA AAAACGAAAA ATTCTCCATA AACATTGAGA AGAAAAACCA 
    AAAAGAAACA ACAACAGCAG GGAAAAGAAG AAAGCAAAGA CTTACGTAGA 
    GAACAGATGA ACGAAAGTTT CGAATTTGAA AGTAGGCTCG AAGAGAGACT 
    AANACGGCGT TTTTAGGGTT AATTCATAAG AGAAACGT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1321321 [Map]; Strand: w
      • AT1G04710.1 - [+] show detail - peroxisomal 3-ketoacyl-CoA thiolase 4
        Distance: -583; Region: promoter
    Flanking Genome Sequence: 11-3032-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGCAAAGAGC AGCTCAAATG GTCAAACGAA ATCGAGAATC CTGAGTTGGC 
    GAATAGAATG GGAGCTGATG TCGTATCAAG TCCTAAAGAA GATTGAGATC 
    CATCTGCTTA GCGATAAATA AGTAAACATG GGCCAAGTTA GTGAAACTTT 
    CGATCTATAA AATTTGCTTT GGGCTTGTAT ATTTATGCTA CCACGACATG 
    AGGTGGTACT ATATAGGTCA GGGCTGATTA TTCTACAAGA TAGATTACAA 
    TTTACTTAAA CGGTCTCGTT AGGGCGTTTG AGAACAACAT GATTAACGTT 
    GAAGAGCGCG TTTCATAAAT T

AT1G04710.1

Model type
Protein coding
Short Description
peroxisomal 3-ketoacyl-CoA thiolase 4
Curator Summary
EC2.3.1.16 thiolase.
Computational Description
peroxisomal 3-ketoacyl-CoA thiolase 4 (PKT4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acetyl-CoA C-acyltransferase activity; INVOLVED IN: catechol catabolic process, ortho-cleavage, protocatechuate catabolic process, ortho-cleavage, metabolic process, fatty acid oxidation; LOCATED IN: peroxisome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 3 (TAIR:AT2G33150.1); Has 22406 Blast hits to 22392 proteins in 2262 species: Archae - 405; Bacteria - 14105; Metazoa - 1004; Fungi - 662; Plants - 281; Viruses - 0; Other Eukaryotes - 5949 (source: NCBI BLink).
Link
InterPro Scan - TAIR