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11-3035-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2884596 [Map]; Strand: c
      • AT3G09375.1 - [+] show detail - pseudogene, putative eukaryotic translation initiation factor 4A-3 (eIF-4A-3/...
        Distance: -734; Region: promoter
    Flanking Genome Sequence: 11-3035-1 - 5-prime edge 
    GGTAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAT CAAAACAATG TATTATAAAC TGGATGTTAG 
    TAACCCTGGT CATGTGGAAG CATCATTGTT CATCTTGATA TGGGCCCATT 
    ACACCTAATT TATTGCTAAA GTCAGTGTTA TTGTTTTGGT CTTTTCTTTT 
    CTTTTTGGTG TGTTATTGAT TCTTAAATTA CCAAGAATTT TGAAGGCTTT 
    AAAAGGTTTG TTGAAGTTGG GTGTCAGTAT CAAAAATTCT AAACTATTGT 
    TTGAGAATTT TCTATAATGT TGTTGATTAG CTTTTCAAAC AATCTCTCTA 
    TTTTGATGAT ATTTTTCATG ATTTTATTTT TTTTAACGAA AAACGTAGAA 
    AGTCATAAAC CAATAACACA ATAATTTAAT TCATTAACAA TCATAAATTC 
    TTTTATTTTA TTTGAAACAA ACTTTTAATG AATTTATAAA AGTATGAATC 
    CAATAACTCT AAATTTATGA ANATTTTATA TTACTTTTTA CAAATATTAA 
    ACTATTAACA CCTAACTTTA ACAAACTTTT TAAAAGTCTT GATTAAATAA 
    CAACAGATTC TCCACAATAT TTTAAATTAC TAAAACTCTA TTTAAATCGG 
    TAACCAATAA CACGTATGTA ATTCGNNCTT TTTTTTTATT TTTCTTTNTA 
    AAAAGGCNAA AANNGGNNNN GGATCGGGGG NNTTCCNTTN TTNAAAACAN 
    ATTNTTNANA GAAAANGGGG GGGGATTTTT NNTTTTNAAN NNAACCCNTG 
    GGGNGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2884602 [Map]; Strand: c
      • AT3G09375.1 - [+] show detail - pseudogene, putative eukaryotic translation initiation factor 4A-3 (eIF-4A-3/...
        Distance: -740; Region: promoter
    Flanking Genome Sequence: 11-3035-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    CTAACTAAAG AGTTTGCAAA CCCTTTAACC CTTCTATGAC CAGCGTTAAT 
    AACATCCAGT TAAGCGTTAA TAATGAAGCT AAGGAAGGCT ACTGTACAAG 
    TTTCAAGGAG AGAAGGATTG CTTGAAATTC ATGACCAATA ACGAATACAT 
    GATATGTTAC CAGTTACCAC CATTATATGA AAATGTTACG TTAAGAACAA 
    ATATTTGGAT TGTTAATTTA TTAAAAATGA TGTTAAAGAA ACATTAGACT 
    AACATAGCTT ATTACTGATT CATGTCAACA CCACAAACTC TCACAACTTG 
    TCTTATACTC TTATTAGTAA AACCATTTAG TTATCTAGTG GTAAAACCAT 
    CAATTCCATT CCATCTTTCT CTGTTTCGAT TCCCATCCGT AACGTTTTCA 
    TTTGGTCAGG CGAAATTATG TCATGATTTT GACTCATTAG AGAATTACCA 
    AGTTCCTGAT TTTGGTAAGA ATATATATAT ATAGAGACAA CACCAACGAC 
    TTTTCATACC ATATTTTAAT CATTTAGCAA TGACAAGTTG TGACTAGATA 
    TTTGAGAATA AAGTGAAAAA CAGAGTAAAT GTTACGAGGC TCTTGTTTTG 
    AGTTAATGTC ATAGAAGAGA TTGAAACAAG AAACTGAAGA CAGAGGTAAA 
    TCATATATAG ACGATGTGCC GAAACTTAGA TGAATCAAAC TAACACACTT 
    GCATCATTTT ATTAAGCAGA GCCNCCACCT CGGGATTCTC TAATGCTGCA 
    GTC

AT3G09375.1

Model type
Pseudogene
Computational Description
pseudogene, putative eukaryotic translation initiation factor 4A-3 (eIF-4A-3/eIF4A-3), strong similarity to SP|P41380|IF43_NICPL Eukaryotic initiation factor 4A-3 (eIF-4A-3) (eIF4A-3) {Nicotiana plumbaginifolia}; blastp match of 84% identity and 4.1e-163 P-value to GP|13957631|gb|AAK50586.1|AC084404_11|AC084404 putative translation initiation factor {Oryza sativa}
Link
InterPro Scan - TAIR