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Mutant Lines
11-3064-1

11-3064-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 191969 [Map]; Strand: w
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -1600; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 1732; Region: intergenic

GCGGTCGATC AAACACCACT TATTAATCAT TGTCTACTTC TTTTATTGGA 
ACATCCGAAT ATATATCTGT AAAACACACT CATCCAAATA AAGTTCTCCC 
AAACTTTATG GTTAATGGCT TAAAAAGCAA TGCTAAAATT AAGCCTGGAC 
ATTCGGATTT TGGTTCGGAT TTTTTCGGAT TTGGATAATT TCTGATGAGG 
GAGTTTATTA TCCGTTTGGA TGATATGACT ATTCGGTTCA GTTTCGGTTT 
GGATGATGTC GGATTCGGAT CAATTTCTGA AAAAAGAAAC TAAAAAATTG 
TTCAATTTTT TTAAAAAAAT TGTTTAATTT TGCAAAACAT TGTATAATTA 
TAACAAATAT AACTAATAAT AATTCGGATA TCAAGGTTAT TTCTGATATT 
TGNGGATATA AATTATAACT AAATATAACT AATATTTTTA TATATATACC 
TTTATTTTGG ATTTAGCGGA TATCCGTTTG GTTTTTGGAT AGGATCGGAT 
TCGGTGGGAG AATT

3 prime edge [+] show sequence

Chromosome: 2; Position: 191914 [Map]; Strand: w
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -1545; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 1787; Region: intergenic

ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GCGCACAATA TGGTGGTGGT GACTACACAA ATCAGGGTGA TGTAACAATT 
GTCTTAAACA TTTTCTATTC TTTTTGAAAC GTAATAAACG CAAATCATAT 
CATGCACCAA CAAATAGAAT CATTCTTTAC AAACAAAAAA GAGTAAAAAA 
TAATAATGAT AATCGGTAGT ACCAATTTAT TTTGGAAATG TACACTAGAT 
AACCCTGCAT TTATAATAGA TTGATAATTG ACCTTGACCT TTAAAACTAC 
ATTTTTGTTG ATTACTATTT GACCAACATA ATTTCACAAA AGTGCATACA 
AATATTTTCA TCAATCCACA CGAAAAATGA CATACCCCTT TATTTCCTAT 
TTTGCCACCA TAGTAAACTA CTTAATAAAG GGGTATATGC TTTATTTAAC 
CTAATTTAAC CTTTATTTTG TTGTGTATAA GTCCTAATGT TTGTATAAAC 
ATAAGTATAA ATCCTTACCT TTTGAATAAT AAGCT

AT2G01430.1

Model type: Protein coding
Short Description: homeobox-leucine zipper protein 17
Computational Description: homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01440.1

Model type: Protein coding
Short Description: DEAD/DEAH box RNA helicase family protein
Computational Description: DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR