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Mutant Lines
11-3073-1

11-3073-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 16831972 [Map]; Strand: c
  - AT5G42100.1 - [+] show detail - beta-1,3-glucanase_putative
    Distance: -753; Region: promoter
  - AT5G42100.2 - [+] show detail - beta-1,3-glucanase_putative
    Distance: -733; Region: promoter
  - AT5G42110.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 11-3073-1 - 5-prime edge
```
CGTGANAAAC TAACAAAATC GGTTATACGA TAACGGTCGN TACGGGATTT 
TCCCATCCTA CTTTCATCTA CGCTGGTCAC AGCACACAGA TGATAAGATT 
ACAAATACCA TTCTTCTTCT TCTTCTCTTG GGTGATGCAA AAGCT
```
3 prime edge [+] show sequence
1. Chromosome: 5; Position: 16831970 [Map]; Strand: c
  - AT5G42100.1 - [+] show detail - beta-1,3-glucanase_putative
    Distance: -751; Region: promoter
  - AT5G42100.2 - [+] show detail - beta-1,3-glucanase_putative
    Distance: -731; Region: promoter
  - AT5G42110.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 11-3073-1 - 3-prime edge
```
TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCTGA 
CCAGCGTCTC TATGAACCTT AACCCATCAA ACCTCGGCTC GAAATTGTCC 
GACCCATTCG TTTTCCTCGA TTCCCAAACC TGATCAATTC ATATCCACAT 
CTCAGTTTCA AACCACAGAA CAATTGAAAT CGTCGAAATC GCAGATCTTA 
AAAAAGAAAG AAAAACCTTT GGGGAGACTG GAGGAAGAAT GGAGGAAGAA 
GAGAGAGCAG CGGTGGAGAC GGCAATGACA GAAGCGACCA CACCGCTTGA 
AACCTTCATC TTCTTCTTCG GATC
```

AT5G42100.1

Model type: Protein coding
Short Description: beta-1,3-glucanase_putative
Curator Summary: encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd
Computational Description: "beta-1,3-glucanase_putative" (BG_PPAP); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, glucan endo-1,3-beta-D-glucosidase activity; INVOLVED IN: cell communication; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G42100.2

Model type: Protein coding
Short Description: beta-1,3-glucanase_putative
Curator Summary: encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd
Computational Description: ATBG_PAP; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, glucan endo-1,3-beta-D-glucosidase activity; INVOLVED IN: cell communication; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G42110.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR