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Mutant Lines
11-3078-1

11-3078-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 23149660 [Map]; Strand: w
- AT5G57140.1 - [+] show detail - purple acid phosphatase 28
  Distance: -220; Region: promoter

ATGCTGTTAA TGACTATGGT AATGGAACAA AATAACATTT GCATAGATGT 
TAATGGTACA AAAGAAGTTT CAACGTAACA AAGATTGGTT ACGAAAAAAA 
AAAAAANGNN CCAAAANTGG GTTAAAAAAN CCAANNTTTT TTGGGNCNGG 
NTTNAAACCC AAAANCCCCA NNGGGNTNAA ACCCCCCNNA ANCCCAAAAA 
AAANTTNCCC AACCCCCCCC CTTTTTTGNN NTTTGCANNG GNAACCCCAA 
AANNAACCTN AAAAAAAANT TTGGNAANNT NANNAAAATT TTTTTTTNNG 
GGGNCNCNCT NNACCAACGG GGGANTANNN AAAANNGGGN NAANNNNNNA 
ANNGNAAANC GGGAANNCCC CGGTNCTTNN TTTCCCCNAT ANAGCGANNN 
TTTTTNTATN GNNTNAAANC CNCGANTTTN CCCNCANNTC CCCCCCAATT 
TNCNNNAANN CNNNNNGAAA ANNNNNCCNN NANNNTCTCN CNTANNNTCC 
NNANCCNNGG GACNCTCGNA AACCNNANGN GGNNGNNNAG GNGAAAACCA 
CCNANAGGTG TNAACGNNGN CNCACGNCCN NGTNNCNTGG ATNGNGNNTN 
NGNNNCCCTA GNNNNAGTNA GNGAATGNTC NTGNNGACCG CGGGGGNNAC 
NACCGNCAGN CNCCNANNNG NTNGCGNGAN NGANNTTANN ANAGAGANGN 
NATATCCACA CCGACACCAC CNNCCANNGC GGGNGGGGGN TNGNNNCNCC 
C

3 prime edge [+] show sequence

Chromosome: 5; Position: 23149544 [Map]; Strand: w
- AT5G57130.1 - [+] show detail - Clp amino terminal domain-containing protein
  Distance: 0; Region: exon4 (3UTR)
- AT5G57140.1 - [+] show detail - purple acid phosphatase 28
  Distance: -336; Region: promoter

AACAGCATCC ATGCAAGATG TTATTTTTCT TACATAATCC TAATAAAAAT 
ATTTTCCCAA ATTTAAAACG CATTTATATT ACATTCGAAG AAGAAAAGAG 
TTACACCAGT CAAACCCCCA CATTAGTAAT GGAAATTTTA CATATTGAAA 
AAGAAAGAAC GAAAGAAAAA GAAACAAAAG AAATTAAACC GAAAGATTCT 
ACTACTCGAA CTTCGAAACT TGGACTTTGT TCGGAAGAAA TGTAGCCATG 
TACCCACCAA CACCCCCACC ATATCCTTTG TTGTCAACTA TACCCCCAAA 
CACCATCCTA ATTACACCCG TATCCTTTTT CCCTCCCTTT TTAACCGTTA 
GTAACCCCGT TTGAAAAACC TCCTTTAACC ATCTTTCAAA CGCACCGTTT 
TGAATCCCGT AAAGCTCCTC TACTAACTTG TCCTCCACGC TAAACCTAAC 
TCCGCCTCCT TCTTCCCTCT CAGGAAAAAT CTCCCTGAAA GCTGCTGTTA 
TCATACCTTT TTCGATACCT GGTTCACATG ACCTGTTTAG GACAAACCGG 
TTTTGAATCC GGTTTANAAA GTTGCTTGAA GAGGAGAACT CTGTCTCCTC 
CTCTCCTGTT AAATCGCTTG AAATTGGACT GATCTCACCT TCTACTTCTT 
CGTCTTCAGC TTTTATGTTC AGGTCGGGGG TAAGAGCTAT TGAACCTNGA 
TTGCCTAGAG CACACTTTCC TTNTTATCCA

AT5G57130.1

Model type: Protein coding
Short Description: Clp amino terminal domain-containing protein
Computational Description: Clp amino terminal domain-containing protein; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G29920.1); Has 283 Blast hits to 240 proteins in 33 species: Archae - 2; Bacteria - 10; Metazoa - 3; Fungi - 0; Plants - 262; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G57140.1

Model type: Protein coding
Short Description: purple acid phosphatase 28
Computational Description: purple acid phosphatase 28 (PAP28); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 29 (TAIR:AT5G63140.1); Has 678 Blast hits to 661 proteins in 227 species: Archae - 0; Bacteria - 324; Metazoa - 0; Fungi - 205; Plants - 115; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link: InterPro Scan - TAIR