1. Home
  2. Mutant Lines
  3. 11-3098-1

11-3098-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1246078 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 19; Region: intergenic
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 650; Region: intergenic
    Flanking Genome Sequence: 11-3098-1 - 5-prime edge 
    NGAGANAGGG AGATANNTNA AANATGNNTC CAANAGATGG NCTGGGGNCN 
    TANNNTNAAG GCTNACNGCC NNGNCCGTCN NCANCCCACN CCGGGGCTNA 
    AATGTANCAG CACAATAAAA GTTGGGGTTT TACNTTGTAA TTTAGATACT 
    CCAAATCCGA TGAGTACTCC AATTTTGGTC CAGGTTGCAT TCGGTTTGGT 
    TGATGTCCAA TATTAACGTA ACCGAACTTT GGGGCTAAAA TGTAAAGCAC 
    AATAAAAGTT GGGGTTTTAC TTGTAATTTA NATACTCCAA CTGAAAAACA 
    NAGTGTTCTG TTCAATAGCA CAAGAGAATT GGTGTCTCTA ACGAGATCAT 
    TGATCATCGC GCACGTGAAG ACTTGGTTTT TNTATTCTCT AATGATCCCA 
    GGAATTGCCN TAATGCNTNT GTTCNGTNNN NCCANATACA GGGTTNGNNT 
    CAAACACCAA ATGTTGATTC TTGGTAAAAA GTNTGAATTT TTTNGCTTTN 
    NTTCNAACAT TNTATNGNGA TNGTGGAAAN TNTTNTGANC CCCGNAACGA 
    GGTTNGATAT CNNGCCTNNG ANAAGAAANC GTNNNTTCGC TANACCCNNA 
    TNANAANGNT NGGGNGNTNC NNAAANTGGT GGGGNNAATN CACGNCNANT 
    TNNNNTTTNN NTNNTNCTNT TNTTNGTANC NNANNGTNAG ANNNCTCTTT 
    TNTCNAAAAN NNACAATATC GNNCAGNNNN AT

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR