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11-3101-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12169571 [Map]; Strand: w
      • AT4G23260.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 18
        Distance: 0; Region: exon1 (CDS)
      • AT4G23260.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 18
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-3101-1 - 3-prime edge
    AATACAGGAG AACTCAATAC GAATCAGACT GTGTTTGATA TCGAGTGGAA 
    TAATTTAACT TCTAGTATGA TCGCCGGAAT AACTTCTTCT TCATCAGGGG
    GGAACAATTC GTCTAAGTAC TACTCAGACG ATATAGCTCT TGTGCCGGAT
    TTTAAGAACA TATCAGCGTT GATGCAATGC ACACCAGACG TTTCGTCAGA
    GGATTGTAAC ACTTGCTTAC GACAAAACGT TGTCGACTAT GATAATTGTT
    GCCGTGGGCA CCAAGGCGGC GTTATGTCAA GGCCAAACTG CTTTTTCCGA
    TGGGAAGTGT ATCCCTTCTC TGGTGCTATT GATCAGATTA ATTTACCAAA
    GTCACCGCCG CCTTCAATTA CACCCCCGTC TCCTATAGCC AACATAACCA
    AGAATGGAAA GTCCTTGTTG GAACATTTTC AGAAAATTGT CTTGTTTTGT
    TTCTGTTTGT TTTTTTTGTT TTTTTTGGTT TTTGTGTATT TATGCTTTTG
    ATGAGTTGTG TTTTGTGCAN ATAGTANAAT ATCAGGAGGA AAAATCGCGG
    CAATAGTTGT TGTTACTGTT GTTACAATAA TATTGGTTGT TTTAGGCTTT
    GTTATTTCCA ATAGAAGAAA GCAAAAGCAA GAAATGGACC TTCCAAGTGA
    GTTTTCTTTG TTTAAAACCT TATACTTTGA AGTGGCACCT TTTCACAAGC
    T

AT4G23260.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 18
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 18 (CRK18); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: kinases;protein kinases (TAIR:AT4G23250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23260.2

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 18
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 18 (CRK18); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: kinases;protein kinases (TAIR:AT4G23250.1).
Link
InterPro Scan - TAIR