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11-3114-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 611649 [Map]; Strand: w
      • AT4G01450.3 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 933; Region: intergenic
      • AT4G01455.1 - [+] show detail - pre-tRNA
        Distance: 217; Region: intergenic
    Flanking Genome Sequence: 11-3114-1 - 5-prime edge 
    CATTCAACAA CTAAGAGTCT TCCTTGCTTT CGTCACTTTC AACTCCATAC 
    ATCAAACAAA ATCGCCTAGG ACTCTGAGAT GTCCAAACTC AAATATTCGA 
    AAAATTAATT TACGTAATTA GTGTAAATTT TTTAAAATCT CCGTTACATT 
    TTCAAAGTCA CGCCAGTTTT TTTTTTNCCC CNNAAAGGTT CCGGGGGTTT 
    NTTTANTAAN TCCCNANTNC CCCCNNACCN NTTNNGGGGC TANGGGTTNG 
    GTACCTTNTT TTTTTTTNGG CNNTTTNAAA AAANCCCCNN TCCCGGGNAG 
    GGNACCCGGG GNNNCGGGGG GNAANCCNAA NTTNCCANCC NGGGGGGGGN 
    AAANGANCCC NNGGGTTNGG NAGGGTTTTT TTTTTTTTNG NCAAAANGGG 
    GGGNAAAAAA ANANGGGGGN CGGGNNANTT TTNGGNAAAA NNCNTTTTTT 
    NAAANCCCCC CCNANCCCCC NNNGNNNGGG GGTNNNNGAN ANNNGTTTTT 
    TTCNCNNNNT TTTTTTTTNN ANNAAAANNN NNNNGGGGGG GGNNNNNNNN 
    NG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 611533 [Map]; Strand: w
      • AT4G01450.3 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 817; Region: intergenic
      • AT4G01455.1 - [+] show detail - pre-tRNA
        Distance: 333; Region: intergenic
    Flanking Genome Sequence: 11-3114-1 - 3-prime edge 
    GTTGAATGCG AGGCTGCTAA GCAAGTGAAG AGAACAGGTG AACAAGACTT 
    TAAAAATGAT TTTTATTCTT AATTTGTTAA GGAACTTTAA AACAAAGAAG 
    AAAAAACCAT GCTTTAGAGC GAGCACTTTG GTAGAGACCC CTTGTCGTGT 
    ATAACGATGC GACATTTATA TATACNTGAG TATTTATTAC TATATATAGT 
    TCCTGATTTG GTGACTGCTT CATCATATAT ATTTGCATAT TATGTGTTTG 
    GATC

AT4G01450.3

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G01440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01455.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Glu (anticodon: TTC)
Link
InterPro Scan - TAIR