1. Home
  2. Mutant Lines
  3. 11-3124-1

11-3124-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5388379 [Map]; Strand: w
      • AT1G15660.1 - [+] show detail - centromere protein C
        Distance: 3125; Region: intergenic
      • AT1G15670.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -1573; Region: intergenic
    Flanking Genome Sequence: 11-3124-1 - 3-prime edge 
    CTAGAGACGA TGTTTCGATG GTTTGAAACG TTGCTATGTA GATTGCAGTT 
    AACGACGAAT CGCACCATCT GTTTTTTTTT TTTTTTTTNA NNNAAAAANC 
    CCCTTTNGGG GNCNTTTTTN NANGGGGTTA AAAANGGGGG NNNNNTTTNN 
    TAAAAAANNN AAAANCCNNN CCNNGNTTTN AANTCCCCCN ANNTTTNAAA 
    AAAANANNNT TGGNCCNAGG GGNCCCCCCC CCCAAAAAAA AAAAAAAAAC 
    CCNNGGGGGG NAANCCCCTT TNANGGGGGG CCCCCCCTNN NCCTTTNNCC 
    GNNCTTNGNN NTTTNNTNCC

AT1G15660.1

Model type
Protein coding
Short Description
centromere protein C
Curator Summary
Encodes a homologue of the human centromeric protein C (CENP-C). CENP-C co-localizes with the 180 bp centromeric regions of chromosomes throughout the cell cycle, but does not completely cover the 180 bp regions.
Computational Description
centromere protein C (CENP-C); Has 380 Blast hits to 353 proteins in 129 species: Archae - 0; Bacteria - 6; Metazoa - 108; Fungi - 26; Plants - 78; Viruses - 8; Other Eukaryotes - 154 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G15670.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G80440.1); Has 1241 Blast hits to 1194 proteins in 125 species: Archae - 6; Bacteria - 99; Metazoa - 399; Fungi - 6; Plants - 685; Viruses - 3; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR