1. Home
  2. Mutant Lines
  3. 11-3186-1

11-3186-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15442482 [Map]; Strand: c
      • AT4G31910.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-3186-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAAA GATAAATATC AAATTTAATT AATCATTAAC 
    TTTGATTAAA GAAGTAGGCG GCATCCCCAA NGTCAACAAA TAAAATCAAA 
    GGTTTCTGGT TTAAGNCCAC GCGTGNCCTN ANCCATATTC CCTTTATTTC 
    TAAACGAAAG CGACCGCCAT TTCCGTATTT TGTCTCCCTA GCACCAAAAT 
    TACATGACCA TTTATTTACT TACGTGGTTC TTTTTTTCTT TGCAGCAGAA 
    TTATATAAAT ATGCAACACT AGTTAGTCTA ACGCTATAGA TATGGATGAT 
    ATTTTAGATA TCTATGTATA CATTTTTGCA GTCACTTTGT AAAATAAATT 
    TTGGAGTTGA AATTTATTTA CAGTGGCTGC CACTGACATT TAATAATTGT 
    TTTTGATAAT TAGAAAGAAA ATCTTTGAAT TAAATATTTG ACAATCTTCC 
    CAAAATCTTT CCACATTAAT TACACGATTA GTTACTAAAA AAAACTTACA 
    AAATATTTAA TATCATTTAA TTACTATAAA ATTATCATTT TTGATATTGG 
    TTTTTTTACA TGACTATAAT AATTCGATTA TAATCATTAA ACCGCAAAGA 
    TATTTGATAG CATTTAATTA CTACAAAATT AAAAAATATT TAGACCAGTG 
    ATTCATAAAC ATATCATAAA TAAAATCAGG GAAGTTTTTT TTACGGGACG 
    GATTGGCGGG ACNGGGTTTG ANAGGACGNT ACTTAATACG ATCGGNAANT 
    TAAAAAAAAA AATA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19622802 [Map]; Strand: w
      • AT2G47940.1 - [+] show detail - DEGP protease 2
        Distance: -570; Region: promoter
      • AT2G47940.2 - [+] show detail - DEGP protease 2
        Distance: -551; Region: promoter
    Flanking Genome Sequence: 11-3186-1 - 3-prime edge 
    TTAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTTTGTCAC 
    ACAAGCAATT AACCAGTTTA CTTATCTCGT TACGCAATTA AACATGATCA 
    TTCAAAATGA AGCACCTAAC GAGTAGACCC ACATGAACAA GTTGCCTAGG 
    TTATATTTTT AAGAAAAGTA GTCATACAGT AGTATAATTT TACATTAAAT 
    CATGCTTTGA TTAAAAGAAT TAAATAACGG GATATAATCA TTTATCCAAA 
    GAAACACAAA GAGAGAGAGA TATAAGTAAT CATTAAGGTT TTTGGAACGA 
    GAACGATCAT AAGTGCAGAT ACAAAAAGGA TTACTTATCA GTTATCATAC 
    CTAATTTGTT TATACGTGAA AAAGATTTCT AAAATGTATA TTCAACCTTG 
    TCTAAAAATA TTTGAAAGTA ATAGATAATA TTGTTGAACT GTAGTTTATA 
    AGAAAGCCAT ATACGTATGT TTGTGGTTTG TGGAAACTGG AAAGCATATG 
    ATATTCATTC TCATCTGGTG GTTGTGAAAT GGGCAGCTCC ATAAAATAAA 
    AGCAAAAAAT AGGCCCATTA ATGTTAAAAG GGGGCCCATT AGGACCCAGT 
    GGTAATTATG AAAATATGGG GAAGAAGCAG GGTCAAAGTG AAGATGGAGG 
    CGCCAAAGAA GCGAGAGTGG ATAAGAAAAT CAAAAAAAGG ATTCTCTTTT 
    TCTCTCTTTC TTCTCACTTC TCTCTGGANG TTNGGGGGCT NTCTCGCCGG 
    CCGATATGGN CGCCTNCGTA GCAAACTGCT GCTTCTCCGG CNTCATGCCT 
    CCGTTAAAAT TA

AT2G47940.1

Model type
Protein coding
Short Description
DEGP protease 2
Curator Summary
Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.
Computational Description
DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 15046 Blast hits to 15035 proteins in 2533 species: Archae - 101; Bacteria - 10614; Metazoa - 317; Fungi - 14; Plants - 376; Viruses - 0; Other Eukaryotes - 3624 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47940.2

Model type
Protein coding
Short Description
DEGP protease 2
Curator Summary
Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.
Computational Description
DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G31910.1

Model type
Protein coding
Short Description
HXXXD-type acyl-transferase family protein
Computational Description
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G41040.1); Has 2584 Blast hits to 2554 proteins in 136 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 40; Plants - 2539; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR