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11-3200-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1137734 [Map]; Strand: c
      • AT1G04250.1 - [+] show detail - AUX/IAA transcriptional regulator family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-3200-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTAA TAAATAAAAA GATTAAAACA AATGGTTATT
    TATTAGAAAC AAATAAATGA CATAAACAAA AATAAAGCTC GAATTTTAAC
    CGAAACAATA AAGCTCTAAT TAAATGGTAA TTAATAAGGG AGAAGAAGAA
    GACGTACNGG CCAAGGAACG TCGCCGACGA GCATCCAATC ACCGTCTTTG
    TCTTCATAAG AGGGAACATA GTCCCAGCTA TTCACCAAAT CCATCAATTT
    CCTCTCATTC ATGAAGTCTA TCATTCCTTC TTCTCCTCCA TGTTTGCCTA
    AAATAATCTT AGGTATAAGA ACTTGATATC CTGAATTTAA ACTTGGTGGT
    TTTCTTTTAT GGTGCAACAA ATGAAATATA CATTTTTCGC AATTGGATTT
    TATCACATAG TTTTCTTTTC ACAGTTTCTA AACTACTACT AACGGGTTAC
    TCAATTATGA AATATTTGTA TACTCGATAA CGGTAATTCA TTTGGGACTG
    ATCTATCATC ATGATGATTA ATTTTTCTTT CTATAGTAAC AATTAATTAG
    TAACTAAATG TGCATGGAAG GATCTACATA TATATATAAG GAATATACTT
    ATAAAACGTA CCCATGGTAA AAGAGCTGAA CATGTTGGAC AAAGCATTAN
    AAAGCTCATC GTAGCTTTTA TACATCCTCA AATCGATTTT CCTCAAGTAC
    GGNGCTCCGT CCATTGATAC

AT1G04250.1

Model type
Protein coding
Short Description
AUX/IAA transcriptional regulator family protein
Curator Summary
Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.
Computational Description
AUXIN RESISTANT 3 (AXR3); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 14 (TAIR:AT4G14550.1); Has 1763 Blast hits to 1762 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1762; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR