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11-3219-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1246218 [Map]; Strand: c
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 159; Region: intergenic
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 510; Region: intergenic
    Flanking Genome Sequence: 11-3219-1 - 5-prime edge
    ATCTAAATTA CAAGTAAAAC CCCAACTTTT ATTGTGCTTT ACATTTTAGC 
    CCCAAAGTTC GGTTACGTTA ATATTGGACA TCAACCAAAC CGAATGCAAC
    CTTGACCAAA ATTGGAGTAC TCATCGGATT CGCTCACTTC CGATCGCTTC
    ATTATGATTT TTTATTGATA ACTTAGATCC AAATTTTGTA GATTTGATTT
    TGTTCAAAAG CAAATTGCAA AGAGCGACAA ATAAGAACAC AAAGAAACAC
    ATCTCCATTT AACTAATTAA CAAAAGAACA CACAAGATTC GTTCGTTTGT
    CAGATGGATA GGAATTACAT TATTACATAA CTTGAAAAAA CATAAACTAT
    AATAAGTACT TCTTAACCAA ACGTCAAAAC ACAATTAAAA GACACAGATT
    TTCATCAGAC TGCCATGGTA GATCCAACAC CAGCCTTGTG CTCTCCCACA
    GTGTGTGGTA CATGACCATG ACCATGAGCT TGGCCTGTAG CATAGTCTTG
    GTCTCTGTAG CCAGGACCAT ATTTGCTGCT GAGTGAACCG GCATGGATCA
    ACATGAGGTA GAGAAGTTGC GTGAACGTCA AAATGATAAT GAAGGCTTCA
    ATCATCTTCA ATCTCCATCC TCTCCATCCT CCTATGTTTA TTTGCTTGCA
    TGCCAACCTT TACCAAAATT AAATTCAATA TTACCATTTA CCATATAT

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR