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11-3229-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1237983 [Map]; Strand: w
      • AT1G04540.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-3229-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA GCGAGTGCAA TAGTGAGCAG TGAATCTGAA 
    ACTCTTCCCA CCACGACAGA TTCTGATGAG AAAAAATCGA GTGAGTATAC 
    ACCTCCTAGT AAAAACCTTA GAGTTCCAAG GCAACGATAC AATTCCATTG 
    AATCAGATCT CATAAATCCG TCGCCAATGG AGAAACCCCA TGTGGTAGTG 
    TCGAGAAGGG AGAGACACGA TGTTATGCCG TATAGTTCGT ATCAACAATC 
    AGGTAAGACA CCGAGGAAGA AGACAAGGAT CGAGAAACAA AGATCAGTGA 
    AAGCT

AT1G04540.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 556 Blast hits to 454 proteins in 75 species: Archae - 0; Bacteria - 32; Metazoa - 92; Fungi - 46; Plants - 336; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
Link
InterPro Scan - TAIR