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Mutant Lines
11-3287-1

11-3287-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 25508690 [Map]; Strand: c
- AT1G68050.1 - [+] show detail - flavin-binding, kelch repeat, f box 1
  Distance: 0; Region: exon1 (5UTR)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCATC AGCCTTATGA TATTTTATTT CTTTTTGTGT 
CTGTTTAAAC TTTTAAAATA TCTTGGCTTA GTTGGTGACT TATTGACGAA 
TATACCCTTT ATATTTAAGA CGAGGCAAGA AGTCTTCGCG CCAGGAGTTG 
GTGGCAATTT TCGTAATTAA AAGGATATAT CAGGGGTATG TTTAAAAAAA 
GTAAGTCTAC TCTTGTTCGA TTGTAACACG TCACCAGGGG ATATTCCGAG 
AAAATATCTA GCCTACTCAA CCACTCCGCT TCTTCCACGT CATCATATTT 
TGTGAAAGAT ATTTGTTTTT TTTTTNNAAA ATNGAAATTN GNGGNAAAAN 
TTTNNTTTTN NTTNGGAAAG NGTNGNANCT NGNAANTNGN ANCCCANTGG 
NANTNAAATN CCCNTANCCG NGNNCNNNGG NNAAAAAANA AANTTTTTNG 
GNAANCCCAA TTNTCAAAAN GGNTCCCCNT ANNGCNGNNG NANNAAATNG 
NTTTTTCGGG GGNAGGGNAA NGGGNTAATA AANCAGGGGN NTTTTTNNCC 
CCNNTGGAAA AANTTNAAAT TTNCCTTTAA ANCTNCCCNC TTTTTTAAGN 
TTTTAANCAA AAAAATTCCT TTNAAAANNC NAAAANNNCC NNNNNNNNGG

3 prime edge [+] show sequence

Chromosome: 1; Position: 25456349 [Map]; Strand: w
- AT1G67880.1 - [+] show detail - beta-1,4-N-acetylglucosaminyltransferase family protein
  Distance: -614; Region: promoter
- AT1G67890.1 - [+] show detail - PAS domain-containing protein tyrosine kinase family protein
  Distance: -830; Region: promoter
- AT1G67890.2 - [+] show detail - PAS domain-containing protein tyrosine kinase family protein
  Distance: -830; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTC 
CCTCGCATGA GAAAATGCAT GGGCATAGAT CAACACAAAT AACACAGAAG 
AGGGAGCAAC TATGCCGGAA TTTCTCCTCC TCCGGATAGG TTTTATTACT 
CCAGCAGCAA ACCTATGTTT CACCATTCGG TATTGGGCCT TTTGGGCNTT 
TTAATTTCTC TTTTCGGCTT GTATCATTTT TATTTTTTTT TAAAGAAAAA 
TCAATAGATA AAAGCAACAA ATAGACCCAG GAAACCAACA GTGTCANATA 
TGCATTTTTC TAGGTCTCAA ACTTGGTGAG TGCTTTTTTT CAAAACTTTA 
TGCAATTACT TAGTACTTTC CAAAACTCTC CCTAATATGA ATACTTAGCT 
TATACTAAAA AACTGTTGAC ATCANAGTAT ATTATATACA NATNGTCTAA 
GTTTATGATT AAATTANATA GTATTATTTG NGTATATTTN AAAGNGGAAN 
CCACGTGGNG GTTGAANANA AAANAAAGAG TNCNTAAGNG ATTCTGANCT 
TTTTCAACTA AAAANACACN ACAAAANCTG GAAGNGGGGG ACTGAGTCAC 
ACAACNCGNG GNGNGGANAN AATGATAAAN GATAATACTT CATCAATCAA 
AGCCAAGCAA CGGAACTAAC GTNGAAACTT TCCTCATTGA CCTAATTACC 
CCTTTTCTCT CTCGTNAGTN CCTCCTCGAN ACAATNTCCN TTTNTCATCT 
TNTNCNCAAA CAAANCACAN TCGCATAAA

AT1G67880.1

Model type: Protein coding
Short Description: beta-1,4-N-acetylglucosaminyltransferase family protein
Computational Description: beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 985 Blast hits to 984 proteins in 94 species: Archae - 0; Bacteria - 41; Metazoa - 63; Fungi - 34; Plants - 129; Viruses - 4; Other Eukaryotes - 714 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G67890.1

Model type: Protein coding
Short Description: PAS domain-containing protein tyrosine kinase family protein
Computational Description: PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 128751 Blast hits to 126912 proteins in 4876 species: Archae - 309; Bacteria - 16105; Metazoa - 47584; Fungi - 11405; Plants - 33369; Viruses - 523; Other Eukaryotes - 19456 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G67890.2

Model type: Protein coding
Short Description: PAS domain-containing protein tyrosine kinase family protein
Computational Description: PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 127928 Blast hits to 126175 proteins in 4896 species: Archae - 310; Bacteria - 16027; Metazoa - 47209; Fungi - 11347; Plants - 33277; Viruses - 520; Other Eukaryotes - 19238 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G68050.1

Model type: Protein coding
Short Description: flavin-binding, kelch repeat, f box 1
Curator Summary: Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression.
Computational Description: "flavin-binding, kelch repeat, f box 1" (FKF1); FUNCTIONS IN: ubiquitin-protein ligase activity, signal transducer activity; INVOLVED IN: response to blue light, positive regulation of flower development, circadian rhythm, ubiquitin-dependent protein catabolic process, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: whole plant, root tip, male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Kelch repeat type 2 (InterPro:IPR011498), F-box domain, Skp2-like (InterPro:IPR022364), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G57360.1); Has 8646 Blast hits to 5789 proteins in 832 species: Archae - 91; Bacteria - 2197; Metazoa - 2116; Fungi - 922; Plants - 2047; Viruses - 0; Other Eukaryotes - 1273 (source: NCBI BLink).
Link: InterPro Scan - TAIR