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Mutant Lines
11-3304-1

11-3304-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 23437926 [Map]; Strand: c
  - AT3G63460.3 - [+] show detail - transducin family protein / WD-40 repeat family protein
    Distance: -552; Region: promoter
  - AT3G63460.1 - [+] show detail - transducin family protein / WD-40 repeat family protein
    Distance: -582; Region: promoter
  - AT3G63460.2 - [+] show detail - transducin family protein / WD-40 repeat family protein
    Distance: -582; Region: promoter
  - AT3G63470.1 - [+] show detail - serine carboxypeptidase-like 40
    Distance: -548; Region: promoter
Flanking Genome Sequence: 11-3304-1 - 5-prime edge
```
GTTTAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCAACGT CTCTGAGTGA TCATGTTATG CCATGTGGTG 
TGTGAGTCGA TGCTGCAATC CTGATTTTCA CACTTGATAT CATTCCATCT 
TTTGTTTCTT CGTAATACAT TTAACTGCAA ACAAATATTA GCNTTATTTT 
CTACCATTGT TTAATACGAA TT
```
3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23437929 [Map]; Strand: c
  - AT3G63460.3 - [+] show detail - transducin family protein / WD-40 repeat family protein
    Distance: -555; Region: promoter
  - AT3G63460.1 - [+] show detail - transducin family protein / WD-40 repeat family protein
    Distance: -585; Region: promoter
  - AT3G63460.2 - [+] show detail - transducin family protein / WD-40 repeat family protein
    Distance: -585; Region: promoter
  - AT3G63470.1 - [+] show detail - serine carboxypeptidase-like 40
    Distance: -545; Region: promoter
Flanking Genome Sequence: 11-3304-1 - 3-prime edge
```
AATTTAAAAC GGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT 
CCCAATGACA TCTTCTCTCC TAGCTCTTTT TTTTCTTCAG ATTCTTAGAA 
TT
```

AT3G63460.1

Model type: Protein coding
Short Description: transducin family protein / WD-40 repeat family protein
Computational Description: transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1); Has 36264 Blast hits to 25632 proteins in 1258 species: Archae - 42; Bacteria - 5004; Metazoa - 13161; Fungi - 7258; Plants - 4512; Viruses - 551; Other Eukaryotes - 5736 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63460.2

Model type: Protein coding
Short Description: transducin family protein / WD-40 repeat family protein
Computational Description: transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1); Has 36280 Blast hits to 25623 proteins in 1259 species: Archae - 42; Bacteria - 4996; Metazoa - 13160; Fungi - 7289; Plants - 4519; Viruses - 551; Other Eukaryotes - 5723 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63460.3

Model type: Protein coding
Short Description: transducin family protein / WD-40 repeat family protein
Computational Description: transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1).
Link: InterPro Scan - TAIR

AT3G63470.1

Model type: Protein coding
Short Description: serine carboxypeptidase-like 40
Computational Description: serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink).
Link: InterPro Scan - TAIR