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11-3395-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2052081 [Map]; Strand: c
      • AT1G06690.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-3395-1 - 5-prime edge
    GTGTCCATAT CCACAGTCTC TCACCTCTCG CAGTGCCCAA ACCTCTTCTT 
    CTTCTTCTTC TTCTTGGCTT CTCCTCCTCC TTTTCCAATT TCAAAACCCA
    AAAACAAATC AGCATGGCCA TGGCTACGCA CTTCACCTTC CCTTTCAACT
    ATGTTGTTTC CGAAGGCTCT CATGGAAGAA GAAGTTTCGT CCGGAAGCTG
    GTCAGAGCTG TAGCCTCCGG AGATTCCGTG GCTCCGGCGA TTTCGGAAGA
    ATCAAAAGTG AAATTGGGTG GCTCGGATTT GAAAGTGACG AAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2052197 [Map]; Strand: c
      • AT1G06690.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: -43; Region: promoter
    Flanking Genome Sequence: 11-3395-1 - 3-prime edge
    ATGGACACGT ATGTTGTTGG CGGGCCAAAC AATTCTTTAA TGAATAACCG 
    GTGAAATTCA AAAACAAAAA AACAAAACTG ACATTGGTTT TCTCTTGGGC
    TTGGTTGGGC CTTTGTTTAT TTACTTTTCA CTTGGGCCTT TTAGCNTTTG
    TTATGCNTGC TTGTTTCTTT TTTTTTTTTT TTTTTTTTTN CTNAAAAANA
    AACCCNCAAA AAAAAAAAAA NGGNNCCANT TNNTAAAAAA ACNNAAACCT
    TNGNATTTTT NTNCCCCNAN NANCCCAANT TTNAANGNAN AANNTNTTNN
    AANTTTTGGG GGNTTTAANN CNAAAGGGGG GNNAAAATTG GNAANAANNG
    GGNNNNTTNA AAAAAAAAAA ANNTNCTTTT TTTNCCCCCN AANNAANGGG
    NANNANNAAN TTTNNCNAAA AANNNTTTTT TTNTTTTTNN NCCNNAAAAA
    ANTTNGGGGC CAAANTAAAT TTTTAAAANA AANNAAAANA NNNTTTTTAA
    ANAAANGGGG TTTNANNNNN NAAANCCNNC NTTTTTTNTN TTTTTTGGNA
    AAAGGGCCCT NNGAAANTTT TTTNNNTTGT TNNCCCGNNA AAAAAAAAAT
    TAAAAANTTN AAAAACTNNN GNCNCGGAAC CCCNCTCCNG GGAGNTTTAA
    GGAAAGNNNT TCCCCCNTCC AAANTTNCNN NTTTTTNGGN NNAAACCNAA
    CTTTNNTTNG CCAAAAAATN NCCCCNCCCN TNNTANNGNA ANNNATN

AT1G06690.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink).
Link
InterPro Scan - TAIR