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11-3425-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5524378 [Map]; Strand: w
      • AT3G16290.1 - [+] show detail - AAA-type ATPase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-3425-1 - 3-prime edge 
    TTTGTAATAT ATATGTACCT CCTGTGCCGT CTCCTTATTT AGGATTTTTG 
    TGGAAAGTTC CTGCTTATAT GTTAACATGG GTTAAGCCAA AGAAGGAGTC 
    TAAACGTGCT GCTGAGTTGA AGAGAATGAG GGAGGATTTC AAGAGGCAGA 
    GGAAGGAGGA GATTGAGACG ATGAAAGAGG AAAGAGTGAT GATGGAAAAG 
    ACAATGAAGG CGCAGAAGAA ACAACAGGAG AGGAAGAAAA GGAAGGCTGT 
    TAGGAAGAAG AAATACGAGG AGTCTCTGCG TGAGGCGAGG AGAAATTATC 
    GAGATATGGC GGATATGTGG GCAAGATTGG CTCAGGATC

AT3G16290.1

Model type
Protein coding
Short Description
AAA-type ATPase family protein
Computational Description
embryo defective 2083 (EMB2083); FUNCTIONS IN: in 8 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 40436 Blast hits to 36159 proteins in 3226 species: Archae - 1511; Bacteria - 13353; Metazoa - 6817; Fungi - 4228; Plants - 3474; Viruses - 31; Other Eukaryotes - 11022 (source: NCBI BLink).
Link
InterPro Scan - TAIR