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Mutant Lines
11-3468-1

11-3468-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 246405 [Map]; Strand: c
- AT1G01670.1 - [+] show detail - RING/U-box superfamily protein
  Distance: -417; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TCATCTATCA 
TAGATGAATC AACGTTTATA ATTTGGGTTC TTCTCCAGCC AATCTTTTAT 
GATTATACGA AGAGTGTGAT TTGGAACGAG ATTGTGATTC TCAAGCGGCT 
TGTTTGTCTT TGGAGAGGTT CGACCTCCTG ACCTTAGCCA CTTTCTGAAT 
T

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 138149 [Map]; Strand: c
  - AT1G01350.1 - [+] show detail - Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
    Distance: 0; Region: exon4 (3UTR)
  - AT1G01355.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
    Distance: -364; Region: promoter
Flanking Genome Sequence: 11-3468-1 - 5-prime edge
```
GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TAGGAAGTTG ACTCCAAAAC TCTGATTCAA TTTTCAGTTT 
GTTTAAATTT AAAAGTTAAT CAGTTTGAAA CAACTATCGT CGTCATCCGA 
ATGAATATAT ATAGGCCAGT GAGTACAACA AAACAAAAAG CT
```

AT1G01350.1

Model type: Protein coding
Short Description: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
Computational Description: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein (TAIR:AT5G06420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01355.1

Model type: Protein coding
Short Description: Putative endonuclease or glycosyl hydrolase
Computational Description: Putative endonuclease or glycosyl hydrolase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G35640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01670.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G61390.2); Has 3857 Blast hits to 3144 proteins in 246 species: Archae - 4; Bacteria - 101; Metazoa - 863; Fungi - 177; Plants - 1725; Viruses - 10; Other Eukaryotes - 977 (source: NCBI BLink).
Link: InterPro Scan - TAIR