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11-3481-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17414213 [Map]; Strand: c
      • AT4G36930.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-3481-1 - 3-prime edge 
    GGTGTAATGA TATCACAGAG AGAAGAAAGA GAAGAGAAGA AGCAGAGAGT 
    GATGGGAGAT AAGAAATTGA TTTCATCTTC TTCTTCTTCC TCGGTTTACA 
    GATACTCGTA TCAATCATCA TCTTCATCAT CCTCCGTCTT CTTCCGACGA 
    AATCTCTCAG TTTCTCCGGC ATATTTTCGA CCGTTCTTCT CCTTTACCTT 
    CTTACTACTC CCCGGCGACG ACTACAACGA CGGCGTCTTT GATTGGTGTG 
    CACGGGAGCG GTGACCCACA TGCAGATAAC TCGAGAAGTC TCGTTTCTCA 
    TCATCCACCG TCAGATTCTG TGCTTATGTC GAAACGTGTC GGAGATTTCT 
    CTGAGGTTTT AATCGGCGGA GGATCAGGCT CAGCCGCCGC GTGTTTTGGT 
    TTCTCCGGTG GTGGTAATAA TAACAACGTT CAAGGAAATA GCTCTGGGAC 
    TCGAGTATCG TCTTCTTCCG TTGGAGCTAG TGGCAACGAG ACAGATGAGT 
    ATGACTGTGA AAGCGAGGTT TTTTCTCAAT CTCTGTTTTT TATCTTTTGC 
    ATGTTTTAAA AGTTGAATCT TTGTCTCTTT CCCGAGAAAA TGTTTCTACA 
    GAGATTTCTC TTTAACGGAT CTGTACTTTA TTTTCCCCCT TAAAATCCGC 
    AATTTTTTTG GTTGTGATTT TGAGTGAAGT TTTTGTCATT TGTGAGTGTA 
    ATAATGAATG CACACCGAGT GTTTGATAA

AT4G36930.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curator Summary
Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.
Computational Description
SPATULA (SPT); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR