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Mutant Lines
11-3489-1

11-3489-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 16690080 [Map]; Strand: c
- AT5G41740.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon3 (CDS)
- AT5G41740.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon3 (CDS)

CCTGAATGTA AGTTCAAGGC CAATTGTAGA CTGTATAAAG TAACTCACTA 
ATGTAAGATT ATGATTCTTA AGTAATTCAC AAGGTAACAA GATTTTTCTT 
AATATGTCAT CAATATCCCT ATCAAGACTA GATTCGATCC TAGATAATAG 
AAGTTCCCAC TCGTGCTTGC TCTCCCCACG CAAAGATGCA CCGACGACAG 
AAAGGCCTAA TGGAAGATTG CCGCAAAGCT CAGCTACTTT ATTGGCAAGC 
TCTTCAAAAC CATCTAGTAC AGAGCTTTGT TTGAAAGCAG AGAGACATAA 
GATCTCAAGA GCTTCTTTCA TGGATGGATA ATCAACACGG TAGATATCGT 
GAATCCTATG TGCCTTCAAA ATCTTCTTAT CTTCTGTGGT AACGATGATC 
CGACTGCCAG AACCAAACCA AGAAGTATAT TCAGCCAATA CGTCTAATTG 
CTTTAGATCA TCTACATCGT CAAGAATGAT GAGCACTCTT CGATTGTGTA 
GCCACTCTTT GATTGCACCT AAATGATGTA TCTCCAAATC ATCTTGGTTC 
AAAATCTTAG ACAGAAGTTG CTTTTGCAAC CCCAACTTGG AATCATGGTC 
AGCACCACCC TTAAGACTTC CCTTGAGGTC CATAAAACAT TTAAGTTGAA 
AACTGCTAGA GAGTCTGTCG TCGAATAAAG CTCTAGCAAT GGTAGTCTTA 
CCAATTCCC

3 prime edge [+] show sequence

Chromosome: 5; Position: 16693181 [Map]; Strand: c
- AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -728; Region: promoter
- AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -728; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
AGCATTCAGG GAGTGATATG GCGGCTGAGA CTGGTCTATA AAAGCTGCTC 
CTGGTTCAAG CCTCCTAAAA TGGTCATTTG AATGAATCTT GTATTATTGA 
TTCGTGTTTT TACTTTCTAC TTTTTAGTAA TTACTTTTTT GCCAGATTGA 
TTGATCTTAT AATCATAACA ATTGTAACTC TGTAATAACT TTCTTCAACA 
TCTCTTTTAC TATGAAACCA AGAATAGTAG CAGCAACCAA CCAAACCAAT 
AATAAACATC AAATCTTTAA GAAATAATAT TCGGATTACC CAAATAATCA 
AACCTTAAGG ATGGGGTCTC AACGACTTTT GGGGGAAACA TTTTGTTTTT 
GTATTTTTCT CTACAGTGAC AAATTCCTTT GAAATTTCAG TTCCGTATAT 
AGCTTATCCA AAACATCAAA TTAAGCATCG TGATCCATAA TTAGAAGCT

AT5G41740.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41740.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 3146 Blast hits to 2582 proteins in 174 species: Archae - 0; Bacteria - 334; Metazoa - 256; Fungi - 13; Plants - 2498; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR