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11-3539-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8277759 [Map]; Strand: w
      • AT5G24313.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -357; Region: promoter
      • AT5G24314.2 - [+] show detail - plastid transcriptionally active7
        Distance: 0; Region: exon1 (CDS)
      • AT5G24314.1 - [+] show detail - plastid transcriptionally active7
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-3539-1 - 5-prime edge 
    TTTAAAAAAA NCAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCCTTN CCTGTANATN GTCCATCTTC AATTTTACCN 
    NAAAAAAATC NTACNTTTGC CTTCTCTCAT AAGTCNTCCT TNGATGGNCG 
    ATGNGACCTC TCATTTNCGA TTATNGTATA TTCAGATNAT NGATACNAGA 
    AGTGGGAATT TGCTGATGCA CATATCANTC TCAGGTTNNG AATGGNTGAT 
    ATCTATACTA ATTTGNGGGN TTTTANGAAG AGTNTCGAGG GANTGTGGAT 
    GATTCTTTCA NGNNTATTGT GGGATTCAAA CANATGATAA TGGACGCCGG 
    GTNNGGCGGA NGANAACATT GGNAAGTACT AAACTCGAGA TNCTGTTCAT 
    TTNCTANTNC CATGTTATGA CCTANGNCCG AATCANGANT CAAAATNANG 
    GNTCTGNTNA GCTTCTGNGA CAGATNTTTC NAAAAAGCTG CCCTNNCCAC 
    TTNGACNNTC NCNNNAAAAT CTCGCTACTT GATTCCAGAT TNGCTTTANC 
    ACACTGAGGA TCANGTGTCT GACNTNGNAA TNAGACNCAT TNCCGGNGAT 
    ACTNGCANAC AANCTTTGGA AAANTNAANN CGGATTTTNG NNACCNCNNG 
    NTNAGNNNNN GACNNNGGAA TAGNAATNCG NCNCGNNAAT NNTCNGNNAA 
    AANNNAGATT GNCCTTNTTG NGAANCCNNA GNGNNGNNNN GNGNCCATAT 
    NAGTNAATNG NTGNNGNGTT CCNNNNTGAG ANTNNNAANA CAAAAGNGGN 
    NNNAGATAAN ACAANCNACA AT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8277705 [Map]; Strand: w
      • AT5G24313.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -303; Region: promoter
      • AT5G24314.2 - [+] show detail - plastid transcriptionally active7
        Distance: 0; Region: exon1 (5UTR)
      • AT5G24314.1 - [+] show detail - plastid transcriptionally active7
        Distance: -35; Region: promoter
    Flanking Genome Sequence: 11-3539-1 - 3-prime edge 
    CAAGCCATTG ATACACAGTA AATAGATAGA ACCGAAATCT ATTTTATATG 
    TAAGCTTCTC CGGTTCGGTT TAATGGTTTA TCTTCGGTCG TGTTCTTATT 
    TGGACAAATC ATCTCTAACC TAACCGGACA TTAATCTTTT TCTCTCTATT 
    CATTTTTTCC GATAAAATAA TTCAACTTGC ACACAAGAAA AAAATTCTGA 
    AACAAATCAA AACCAATACC AAAATCTAAA ATCATATAAT ACACACAAAA 
    AATATTTTTC AGAAATCAAT CAATCTAATA ATAGTTAGTG GGAACCCTCT 
    ATTGTGACTT TGTGAGCTAT GTATATACAT AAGACATTAC AAGATGGAAC 
    CTCAACATAG TTGATAAGCA AAGAAAATAA CTCTATCGAT CACCGGATAA 
    GAAAATGGTT TCTAGGAATC ATCTCTTAAT ATGTTGTGTT CTCTTAGCTA 
    TGATCATGAT CGGGCATGCT CAAACCAACA GGAAACTTCT TGACGATAAT 
    GTACCATCCT CTTATTTTCC ATCGATGGAG TCTCGTCAGG TTTTTCTTCC 
    TTCTTCTCAT CGTTCACTTG TTGCTGAGCA TTACGACAGA TCACCACCTC 
    CACCACCACC CAAAAGATCA GAAGTTGAAC CCCAAACTGA TGGTGTCTAG 
    ACCATTGAGT GATGGTGAGA ATCGGTCCTG ATGAAAAGAC TCGTGAGTTG 
    GTACCATGTT TTGAAAGAGC ATACATATGT TTT

AT5G24313.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G24314.1

Model type
Protein coding
Short Description
plastid transcriptionally active7
Computational Description
plastid transcriptionally active7 (PTAC7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, nucleoid; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G24314.2

Model type
Protein coding
Short Description
plastid transcriptionally active7
Computational Description
plastid transcriptionally active7 (PTAC7).
Link
InterPro Scan - TAIR