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11-3545-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3254720 [Map]; Strand: w
      • AT5G10340.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-3545-1 - 5-prime edge 
    CNTTGAAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCGGTC ATGTGCAACC TCGGTGATCG TTTGTGCGTA 
    TCCGAGCAAA AGTGGCCCAA CCAAGTCATA TGGTCGTTGG ATGATTCAGA 
    CCACAAGACA TGGAAGCAAA TATATTCCAT AGACCTCATT ATCACCTCTT 
    CTTTGTTCTT TAGTGCCATA TTCGCATTCA CCCCACTAGC AGTTTTGGAC 
    AAGGACAAGT TATTGTTTTA TGATAGTACA CACGGGGATG CATTCCTAAC 
    ACATGATCCA GATACCAAAT CTTATGATTT GCCTTACACA TCTAATCGCT 
    GTGCAACTGT TGTTTGTTAT TTCCCGAGTT TAATTTCTAT TTTGTAGACT 
    TGAATGATTG GTTATTTGTC CAAGCATTCT TTTTTGGTCG TTATTTGTCC 
    AAGCATTCTA GTTTCTGATT AGTTTACTCA CTGGGTTATG AATTACTATG 
    TTTTATCAAT ATCAACATCA CATTACAAAT TTTCATAAAT TTAATGTTTT 
    GATTATACCA TACATCAAAA GTACTAATGA CGAGAAGAAA AAACATTATT 
    CTTTTTTTTA CTCTGTAATC ATCGATTCTC CAAACCGAAA AGATAACAAA 
    TACTATAAGA AATAAGGGAT TTGATTATAC CATACATCAT TGATTAGTAA 
    AGGTTAGCTT CTGACTAAGG GATTTTTTGC GGAAACATAA TAGCTTCTTA 
    CAAAGGCTTC TNTACGTAAC ATNAATCTTC TTGTTGGGNT ACT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3254696 [Map]; Strand: w
      • AT5G10340.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-3545-1 - 3-prime edge 
    TTTGAAAACA GGTAGAGGTA TTTTATCGAT GACGATATAA TATTCATCAG 
    CAGACATTGA GAAAGGGAGC TTTAGAGATG ACTTGGAACG TTTCGGAGTG 
    AAGATCCAAA GACAAAACCA TGGTTTCGCC CTCGTGTGAC AAGGCAGTGA 
    ACCAATGAAG TGACCCGTCT ACATAAACAG GATCTTGGGT GTGAAGAATC 
    AGATGAGGGG ACGCGGGGAA AACGTACCTC CAAGCGTTGG TGGCAAAATC 
    GAAAACTTCA CAAGTAGTAG GCTTGTCATT TAGGTCTAAC TCAGCGGAAT 
    TATATAACCA AACTGGCTTG TAAGTGCCAC TGATTTTGTC TTTGCCAAAT 
    CCAGGAGTAG GGCATGCGAC TTTAAAGCAC TCGTGTCTCT CACCCTTGTC 
    GGCAGCGACT AGTTGATAGT TGCATTTAGG GAAAGTTCGA TGCCATCGAG 
    TGGTGGGATT GACGACAATA CTCGGCAGTT CATAGAAACT GAAGAGGCAT 
    ATCAGACCAT CACAGCTAGT ATTGCAAACG AAGTACAACT TGTCCTCCCA 
    AGGAGTAGGG ATCTGAACAG AAGCTGCAGA TGACTCCACC AAAAAAGTTC 
    TCAGAGCTTC AAAGCTGCTT ATGCTTGGAT CTTGTTGACG AGCACAAGGA 
    TCATATAAGG ACACCAAAAA GCACATGTGG ATCTCCTGAT GATTGGCTAA 
    NATGGGTGGA TCAACTGTCT TTCTTGGAAA CTAGGGGATT GGATTGTANA 
    CATCCATTGC TTCGATTCAG ACTTNACCTT GANGAGGGTT TTCA

AT5G10340.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR