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11-3564-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 6309881 [Map]; Strand: c
      • AT5G18910.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -462; Region: promoter
      • AT5G18920.1 - [+] show detail - Cox19-like CHCH family protein
        Distance: -183; Region: promoter
    Flanking Genome Sequence: 11-3564-1 - 5-prime edge 
    GNNAAATCCC TCCGGAGATA AAGAACTTGA CTCNTTTACG CGAATTACCA 
    GCNCGGGCCG GCGANCACNC AGTGNCCTAT ANTCCACTAA CCTTTGTCGG 
    GTCACTGTGA CACGTGGCGT TACCCACCAA CGTGGGAGCT ATCACAATCA 
    ATAGAGAATA AACTACCAAA CAAACAATTT TTGTTTTCTT GAATATCAAA 
    GAAAATGTCA TTGTTTTTGT TGCAAAATGG TGATTTAAAT TTTTGTTCCA 
    ATTTGACAAC TAAAAAGACA TTAGTCTGTT AGTATTCTAA ATTTAGGATT 
    TTAAAACATT TGATCAAATT ATGGAGAATA TTCTCTGNCG ATTTTCTGTC 
    TGAAATGCAA AAATGGATAT TTCTTTCGTC TAAGATTAAG AAAGAGAGAA 
    GAGGCGGATT TTCAGTTAAT AACAAGAAGA GAAGATGAGG TGGTGTAAGA 
    GAAAACCAAT GATCATGGNT ACTTTCTCTC TCTCTTTCCT TAGGNTTTGA 
    NCTCTTCTNT CTTTCTCTCT CTTTTCCCTT NTTTGTNTCA TTTCTTGTCT 
    NCAATCCATG GAAGGNCTTC GAGACTCATC GTCNACAACT ATNTCTTCCC 
    NAGANGNNGG CTTCTTNNTC TNCTNCNTGG TAAATTGTNN TTNATCTTTT 
    CNNAAGATAT ACTGGTGTGG TTNNAGAAAC NTTTNNCANA TNTNGATTNG 
    ANTATGTNCN GGGGC

AT5G18910.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: peroxisome; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ROP binding protein kinases 2 (TAIR:AT3G05140.1); Has 112793 Blast hits to 111645 proteins in 4265 species: Archae - 108; Bacteria - 12991; Metazoa - 42065; Fungi - 9590; Plants - 31347; Viruses - 418; Other Eukaryotes - 16274 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G18920.1

Model type
Protein coding
Short Description
Cox19-like CHCH family protein
Computational Description
Cox19-like CHCH family protein; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR