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11-3574-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1205342 [Map]; Strand: c
      • AT1G04440.1 - [+] show detail - casein kinase like 13
        Distance: 0; Region: intron13 (CDS)
    Flanking Genome Sequence: 11-3574-1 - 5-prime edge 
    GATAAACNAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCGTT TTTGTTCGGT CGGTAACGGT CGGTAACGGT 
    CGGTAACGGT CGGTAAAATA CCTCTACCGT TTTCATTTTC ATATTTAACT 
    TGCGGGACGG AAACGAAAAC GGGATGCCTG AACATTCTCT GAGGTTCTTG 
    GTCTACTAGA CTGATCAGCT TGAACGCCGG TTCCTGAGCC ATTTCTTCTG 
    GTGTATGCCT CGAAAACACC TGAGAACCTC TCACGGCTGT CCTGTCCAAC 
    TGTATATAAT TCAGAGAAAA GTTTGTTAAT ATCTAAGTTT CCTCTACAAG 
    CGTTAAAGCT GTGTAATAAC TACTTGACCA GAACCCGAGC TGAATCATTG 
    ATTTTGAGAA CAGCATAACA ATACATTTTG AACCGGAGAG AAAAGACAGG 
    TTAATTCAGC CGAAAACCAA ATCGGGTAAA CACAGAATGA GAGCAGTTAC 
    AAGGAATAAA AAGTTACTCT ACCAATGATT GTAAAGTTTT AAATCTGATG 
    CTTACTTGGA GGCTTTTCCG CTTTGTCGGC AGATGGTACT GGAATATTCA 
    TAGCTGGTCT TAAAGTTGGC TAATGGAACA GGAAAAGCGT GAGAAGGTTG 
    ATACACTATT CAAAATGATA AGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1221720 [Map]; Strand: c
      • AT1G04500.1 - [+] show detail - CCT motif family protein
        Distance: 0; Region: exon5 (3UTR)
    Flanking Genome Sequence: 11-3574-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCTATCT ATAACAATAC TATTTTTGTT 
    TTATTTTTGT AAATCATAAG ACCAAGTAAG TAATCCAACT CAAATCCAAG 
    ACTGGATTGG ATAATTGCAT TTGAAAGAGT TCACACCACT TATGTGTGAA 
    AATATGTCCG AAGAATCAAC TAACTGTTCT TCTTCCTTTA CCCCCACCTG 
    CAAACCACAC CCCCGTTTAG AAACGCTTTA TTATATCAAA CAAAAACTAA 
    TCTGTTTTCT AATTGTAATC AAACAAGATT AATCTTACAT CATCATCATC 
    ATCTTCATGA TGGCTTGAAC AGGCTTGTCT ATTTGGTTCA CCAAATTCAT 
    CATTCTTTGC AAATCTTCCT CTAACTCTTG GACGACTATC TGCCAACGTC 
    TTCCTACATG CATACTACAA CAAAATATAA CAAAAAAAAC ATGTGAACAA 
    ATCGGTATAT GGATCACCAC TGGTTTAATC CGGTTATGAT GGTTAAGCAC 
    AAAGACCTTG ATTTTCTTGC TGAAATTCCT CTCGTTCCTC TTCTTCATAT 
    ACCTATGAAT CTTCTCTTTT CTCTGCTCTG CCGAGAGTTT TCCGACTTTG 
    TTGAAACTCG GGTCGTCTAA ACCGGTTATC TCCGTCCCTA ACTGCGGGAG 
    AACCGGCTCT GCCACCATGT GGTTCTGGTT CTCGACACCG TCAAGTCCCT 
    ATTAAGAAAA CAAACCCCAT AACCGGTTAG TATCAGACCG GTTTACTAAT 
    CTGGGTTCAT TACACAATTT GNTTGCCAGC AATACCTTTC A

AT1G04440.1

Model type
Protein coding
Short Description
casein kinase like 13
Computational Description
casein kinase like 13 (CKL13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 8 (TAIR:AT5G43320.1); Has 52915 Blast hits to 51269 proteins in 2162 species: Archae - 36; Bacteria - 8821; Metazoa - 19243; Fungi - 5604; Plants - 8347; Viruses - 301; Other Eukaryotes - 10563 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04500.1

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
Link
InterPro Scan - TAIR