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11-3608-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 409215 [Map]; Strand: w
      • AT2G01900.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 201; Region: intergenic
      • AT2G01905.1 - [+] show detail - cyclin J18
        Distance: -1112; Region: intergenic
    Flanking Genome Sequence: 11-3608-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AATTTGCATA AGCATTGTAA GAACTCGAAA TTCATGAATA ATATTTTACC 
    ATACAAGTAT ACAACTGTCA CTTGTCGCCA AGATTGCATA AATAATCAAT 
    ATTTAACAAA TCATCTTCTA TAGATTCTCT TATTACACAA CTTTTATAAG 
    CT

AT2G01900.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01905.1

Model type
Protein coding
Short Description
cyclin J18
Curator Summary
cyclin J18 (cycJ18)
Computational Description
cyclin J18 (CYCJ18); CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR