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11-3677-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9240697 [Map]; Strand: c
      • AT1G26730.1 - [+] show detail - EXS (ERD1/XPR1/SYG1) family protein
        Distance: -738; Region: promoter
    Flanking Genome Sequence: 11-3677-1 - 5-prime edge
    ATATTTGTTA CTGTTGATGG AAGAAGAAAA GAATTTAGAG GAAAAAAACA 
    GAGAGTGAGA GACGTAGAAT TAAAAAACAA AGGGAGAGCA ATTAAGTTTT
    AGTATGGCGG CTTAGAGAAA ATTACNGTTT TGAGAAAAGT TTCTGATACC
    TTGTTGAATG ATGAGAACTG AGAAGCACAA TATTTGGTTC CCTTCTCCGT
    GTATTCAATT ATCTACAGTA AAGAGTACAA TGAATCAATT AACATGATTA
    CATAATATGT GATATTCCTA AAATAAGATG AGAGTAATAT GAGTTTCCTA
    ATTTATCAGT TACATTGTTA AACAATGTAC ACGGTGAACG ATACACTTAC
    TATTTGCAGT GGATGATCCA TTATTACGGT GGTTAACTTA AATACAATTT
    TTACCGTCCA TCGTCATGTT CACAGTATCC ATTATTCGCA GTAGTCAATA
    TAATATTTAG TGGAGATGAT TAGCAATCCT CTTTAGTCTA TACATTGCTT
    ACCGTTTACC TTATGTCGTC ATAAACAGTA AACCATGTAG TATAGTTCTC
    AATGGAACAT TATGTAGTAA AAAACTTTCT AAATACGCCA AAATTACCCA
    AATTGCAAAT TACAAAATAA AAAATTACTC TNGAAATTTC CTATGTTAAC
    ATTCATCAAT CTTTGAGTGA CAAAAAAAAA AAAAAAAANN ACTTTTNTTN
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9240761 [Map]; Strand: c
      • AT1G26730.1 - [+] show detail - EXS (ERD1/XPR1/SYG1) family protein
        Distance: -674; Region: promoter
    Flanking Genome Sequence: 11-3677-1 - 3-prime edge
    CTTTTATCGG TANAGGTATT TTANTNGACC GTTACCGACC GTTTTCATCC 
    CNTGATCCAC CGTAAAACAA TGTATCGGTC ACTGTGAACC GTGTGTTGCT
    CACTAGAACA GTGTGGAAGT GCATCATTCC ACGCAAAAAG TGTATCGTCC
    ACCTGTTTTC TTTCTTTTGT ATTTGTTTAT ATTATTTTGA TGTTTGTTTT
    TACCAAACAA CCACTTTGAC CCCTTTAGGA TTTAATTTAG AGGAAAGACT
    TTTTGTACAT TGTGAATTGT TATGCAATTA TTTTATTTTA GTCGTCAATC
    TGTCCACCCA AGAGCCCACC ACAACAAACA TCTTTTTCAA TTGTATTTCA
    ACTCTTTTGA TTTTTCTCAC GTGAAATTAT ATCCACTTGC AAATCTTCAT
    GTGACTCAAT ATCCCTCTCT CTATAGTCTA TATACATATA TATATATATA
    TATATAAATA TNNGGNANTN GNNGAATANN CTCCGANTCT TNNGCGTGGN
    NGGCANNTTN TTATNNCCCC CCCNCTNNGN NGNCTCNNAC GCNCCTGNNN
    NGTNTNATTT CNNNCNNNAA ANGGTATNGN TTTGGGNGCN AGTNGGNTNT
    NNGCACAANN TNTGTGNTTC TNTGTGNACC NCATTTTNTN NANTGAGGGT
    GNGAGACACA TANANTNTTN TTNGCNAANA AGNGGGNCCC TNATANCNTN
    AGGNTTCCCC NCNNTTGCAA NGNCGTNNAG AGGAATCCTN TGTNATTTGG
    GGGAAACATT ATANGGAGNN NTNAGAN

AT1G26730.1

Model type
Protein coding
Short Description
EXS (ERD1/XPR1/SYG1) family protein
Computational Description
EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G35350.1); Has 1169 Blast hits to 1113 proteins in 206 species: Archae - 0; Bacteria - 6; Metazoa - 255; Fungi - 426; Plants - 338; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink).
Link
InterPro Scan - TAIR