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11-3678-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9240763 [Map]; Strand: c
      • AT1G26730.1 - [+] show detail - EXS (ERD1/XPR1/SYG1) family protein
        Distance: -672; Region: promoter
    Flanking Genome Sequence: 11-3678-1 - 3-prime edge
    TTAAAACGGT AGAGGTATTT TATCGACCGT TACCGACCGT TTTCATCCCG 
    TGATCCACCG TAAAACAATG TATCGGTCAC TGTGAACCGT GTGTTGCTCA
    CTAGAACAGT GTGGAAGTGC ATCATTCCAC GCAAAAAGTG TATCGTCCAC
    CTGTTTTCTT TCTTTTGTAT TTGTTTATAT TATTTTGATG TTTGTTTTTA
    CCAAACAACC ACTTTGACCC CTTTAGGATT TAATTTAGAG GAAAGACTTT
    TTGTACATTG TGAATTGTTA TGCAATTATT TTATTTTAGT CGTCAATCTG
    TCCACCCAAG AGCCCACCAC AACAAACATC TTTTTCAATT GTATTTCAAC
    TCTTTTGATT TTTCTCACGT GAAATTATAT CCACTTGCAA ATCTTCATGT
    GACTCAATAT CCCTCTCTCT ATAGTCTATA TACATATATA TATATATATA
    TANNAATANN GGGGACNTGN TNAATANNCT NNGNGTTTNN GCGNGGGNGG
    CAANTTTATA TNNCCCCACN CTTTGTNTCT CNNACACGCT NGNNANTTTA
    TTTCTCNCTA AAANAGGNTT TTTCTNTGCG GGNTNGNNTN ANATGCGCAN
    AAAAATGTGN TNTTNTACTN TGCANNCCAT TTTTTCNNTG GGGNGTGNGA
    GAGANAGANA TTTNTCNGNT ATAANAGAGG TTNTNTAAAA ANTNTGGTNT
    TCTNNGTNNN CCCCAAANNA GNCCGGGANA NNCNAATNNT NAGGNGGGGG
    AAAATATTTT GNGGGNNAGG TNNNNCNCCG

AT1G26730.1

Model type
Protein coding
Short Description
EXS (ERD1/XPR1/SYG1) family protein
Computational Description
EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G35350.1); Has 1169 Blast hits to 1113 proteins in 206 species: Archae - 0; Bacteria - 6; Metazoa - 255; Fungi - 426; Plants - 338; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink).
Link
InterPro Scan - TAIR