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11-3694-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1280947 [Map]; Strand: w
      • AT1G04610.1 - [+] show detail - YUCCA 3
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-3694-1 - 5-prime edge 
    GACCCGGTCC TAGTTTAGTG AAAACCCTAC TCAAATTGTG TTTCGAATGT 
    GAGCAATAAA TGCAAATGAA CCATTAACAT TTATATTTTC ATCGAAAAGG 
    ATACAAAAAC GTGGTACTAG TTTTTGGTTA GAAATAGAAA TCCGGTAATG 
    ACAGTTAGGA CTAAGAATTA GGTCAATAAA TTCGTATGTG TACTAATTTG 
    GTGTGTTGAA TTTTAATTGT ATTAACAGGA CAACGACTTC TTCTCCGATG 
    ATGGGATACC AAAAAACCCG TTTCCAAACG GATGGAAAGG AGAGGCGGGA 
    TTGTATGCGG TAGGGTTCAC GAGAAAAGGA TTGTTTGGTG CGTCGCTTGA 
    TGCTATGAGT GTGGCTCATG ATATTGCTAA TAGGTGGAAA GAAGAGTCTA 
    AGCAACAGAA GAAAACTGCT GCTGCTCGTC ATCGTCGTTG TATTTCACAT 
    TTCTAATCAT CATTATCAAA TTTAGGGAAA AAAATATTCA AAAAAAGAAG 
    AAGATAATTA AGCCCTCTCC TCGGAAGAAA ATACCCCCAA AAAAAAGAGA 
    ATTGTGAAAA GAAAAAAATA ATAGGGGGAT TTTTCTTTGT TTTTTTAGGA 
    AGATGTGGCT TTTTTATGTA TTTTTATTTT AANAGNGCTT TATTTNGTNG 
    NNGGATTTTT TTAAANCTNC ATTTAAAATT TGNACTCTGG AAAAAAGTTT 
    NGCTAANCNA ATATA

AT1G04610.1

Model type
Protein coding
Short Description
YUCCA 3
Computational Description
YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink).
Link
InterPro Scan - TAIR