Home
Mutant Lines
11-3703-1

11-3703-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 37582 [Map]; Strand: c
  - AT1G01060.3 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01060.1 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01060.2 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01060.4 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01060.5 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 11-3703-1 - 5-prime edge
```
CCGGGAACGA TGACTTCTCC GGGGAGTTCC CGGTGAGATG ATAAGTCAGA 
TTGCATACTT GTCTCCTCCA TGGCTACTCT CAAGGGTATA ACAGTTTACA 
TTATGAGCAG TTTCTAGGAT TCCTATAACA TACTAAGATC TCTGTTTGGC 
TGCTGAGAAA CTTATAGAAG CGATTAACTA AATCTTATTA GCTCTAAAAG 
TTAGCATAAA TGATACGAAT CTGGTGATTG ATTACTGATA TGAAGATTTG 
TGAAGGTTTT GGCTGCGGTG GATTCGTTTG GGTGAGGCTT TTGTGAATAA 
TAATAAAGGG AATT
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 37698 [Map]; Strand: c
  - AT1G01060.3 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01060.1 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01060.2 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01060.4 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G01060.5 - [+] show detail - Homeodomain-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 11-3703-1 - 3-prime edge
```
GTTCCCGGAA ATAATCAAAT CGGAAGCAAA ACAAAAAAAA ATCTCTAAAA 
ATAAATTTAA AAAACAGAGA GAAGAAGGAA GAAGATAACT GAAGAAGAAG 
AAGAAGAAGA AGAAGAAGAA GAAGGANGAC CTGTTTTAGG CTGAAGAAGA 
CTGGAAGAAG AAGAAGAGAA GCCAGAAGCA NTCTCAGCCA CAACAATTTT 
TCCCCTANTT TTTGGAAAAA TTTTAATTGA AAAGTTTATT TGAGGCTGGA 
NCANCNCCNN GGGTNTAAAT GGAAAAAACA GAAGTCATCG CAGATCGACN 
CGTGGTGATA TTGTNGTGGC TGTCTACTGC NCTTTTTGGT NTATCTCAAG 
TTGCTTCTCT ACGAGCCAGA AGCT
```

AT1G01060.1

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1); Has 2469 Blast hits to 2022 proteins in 280 species: Archae - 2; Bacteria - 257; Metazoa - 292; Fungi - 162; Plants - 1048; Viruses - 29; Other Eukaryotes - 679 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01060.2

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1); Has 2469 Blast hits to 2022 proteins in 280 species: Archae - 2; Bacteria - 257; Metazoa - 292; Fungi - 162; Plants - 1048; Viruses - 29; Other Eukaryotes - 679 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01060.3

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01060.4

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1); Has 2567 Blast hits to 2041 proteins in 275 species: Archae - 2; Bacteria - 252; Metazoa - 294; Fungi - 166; Plants - 1044; Viruses - 30; Other Eukaryotes - 779 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01060.5

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1).
Link: InterPro Scan - TAIR