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11-3709-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17088694 [Map]; Strand: c
      • AT4G36105.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 3574; Region: intergenic
      • AT4G36110.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -1255; Region: intergenic
    Flanking Genome Sequence: 11-3709-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AATTATGTTG GTCACCGACA AAAATACAGT 
    ATATATAATA AGTGCCATGC GGAAAAATCA GCGGAATTTG AGAACGTTAA 
    TTGTATAACT ACAAACATTT TGGGGTCATT TCAAAATTCA GTCAAAGAGT 
    TAGAACNTTA CAAACCATTA ATATCATTTA CGGAAGATTA AAATATGAAA 
    ATTTGATGGG TTAACTAATT TGGTAACTAA AAATATAATG ATCTAAATAG 
    TTTATCGGAA ATATGTTTAT AAAAACATAT GGGAAAAGAT GTAGCTAAGC 
    AAACTTCGTC CCCATGTGAA AATCTGAAAA CGAAAACAAA TGCTTAGGTT 
    GGAACCTAAT CTTTTGTTTA ATTGACAGTA TCAAATCCAT GCAAGTTCCC 
    ATTTCATTCC TCCGACGCCT TGTGTTCCAC GTACTTCTTT CCATTTATAT 
    ATTCAACTTC TTATTTTTCG TTCCTTTTTT TGCTTTTTGC CTATCATTTT 
    AATGGTGATG AATCAATCAA CATCATCAAA CATTTTCATC TTTGGCTTTG 
    TGATAATTCC AGTCGAATTA ATTGCAAATT TTCCGTGGTA GAAACACCAT 
    ATCGTGTTAT CTTGATAGCC AAAAAGGAAA TTTTAAGTGT GGTTGAAANG 
    ACTTTTTGGC TGGTTCTACA ATAGATATCC TTTGNCTAAT NATATTTTTN 
    GTTAATCAGG TGATTACCAN CCCGGGCCGC NACCAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3899730 [Map]; Strand: c
      • AT1G11595.1 - [+] show detail - pseudogene, putative glucose 6 phosphate/phosphate translocator, blastp match...
        Distance: 31; Region: intergenic
      • AT1G11600.1 - [+] show detail - cytochrome P450, family 77, subfamily B, polypeptide 1
        Distance: -2282; Region: intergenic
    Flanking Genome Sequence: 11-3709-1 - 3-prime edge 
    TTTTAAAANG GACTTCCAAA CCCTCTTAAA CATGTCAATG CCCTGGGTGC 
    TGCCATCGCG ATTCTTGGAA CTTTCATTTA TTCTCAGGTA AAAAATAGAG 
    TGAAGAAAAA TCATATTCTG CTTGTTCTTT GTCTAGGAAT GCTTGAACCT 
    TTAGTGATAA CTCTATGAAT TGGCCAATGT GGTATCAGCA TTTTGAATT

AT1G11595.1

Model type
Pseudogene
Computational Description
pseudogene, putative glucose 6 phosphate/phosphate translocator, blastp match of 60% identity and 2.3e-78 P-value to GP|2997593|gb|AAC08526.1||AF020816 glucose-6-phosphate/phosphate-translocator precursor {Solanum tuberosum}
Link
InterPro Scan - TAIR

AT1G11600.1

Model type
Protein coding
Short Description
cytochrome P450, family 77, subfamily B, polypeptide 1
Curator Summary
member of CYP77B
Computational Description
"cytochrome P450, family 77, subfamily B, polypeptide 1" (CYP77B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 32592 Blast hits to 32103 proteins in 1633 species: Archae - 48; Bacteria - 3170; Metazoa - 12143; Fungi - 6852; Plants - 9226; Viruses - 3; Other Eukaryotes - 1150 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G36105.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: leaf apex, cauline leaf, flower, carpel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17990.1).
Link
InterPro Scan - TAIR

AT4G36110.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G18010.1); Has 1361 Blast hits to 1344 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR