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11-3728-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 346066 [Map]; Strand: w
      • AT2G01800.2 - [+] show detail - COP1-interacting protein-related
        Distance: -812; Region: promoter
      • AT2G01800.1 - [+] show detail - COP1-interacting protein-related
        Distance: -812; Region: promoter
      • AT2G01800.3 - [+] show detail - COP1-interacting protein-related
        Distance: -812; Region: promoter
    Flanking Genome Sequence: 11-3728-1 - 5-prime edge
    GTTTTGCATG CGTGGGATGA ACAAACTACT CTGTAAACTT GTAAAGTGAG 
    AAATGAAGTT AATTACCAAA GTGGATTACC CATCGGACTG CTCAAAAGCC
    CTTTCAAGTT GATCCTTTTG AGTTAGGTAA ACATACAGCT ACGATTTTTA
    ATAAAATGCT TAGTATGATG TCGACTTTTT ACTATAGAGG TTAGTCCGTT
    CAAGAACTTT TTGTAGATAG ACCATATTTG CACAAAAAAA AGGGTAGATA
    AACCATATAT ATATATGGAC ATATTCTATA TATTATATAT ATAGCTCAAA
    TTTGGCATAC AAAGTAGTGA CCCCCGCGGT TAAAATGACT CAAAATCCAC
    AATTTGTACT TTTACACGTA TTTCATTATC ATTTGCTTAA ATTTTGATTA
    TGTTTTGCTT ANATTTTTTT ATTTATTTAA TTTAATTACA TATCAAAAGN
    GATAATATAT ATATATATAT ATATNNCACT NANCTCTAAA ANAGTTACAC
    NCNCNTATNT NTNNTGNCCN NGGGGANAAC ANNTNAAACN CCANTTTGGG
    ANATATTTTG GGGANGCNCN AAANATCTCC CNNGGGGGCN NNANNCCNCG
    CGNNNNTATA AA
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 345943 [Map]; Strand: w
      • AT2G01800.2 - [+] show detail - COP1-interacting protein-related
        Distance: -689; Region: promoter
      • AT2G01800.1 - [+] show detail - COP1-interacting protein-related
        Distance: -689; Region: promoter
      • AT2G01800.3 - [+] show detail - COP1-interacting protein-related
        Distance: -689; Region: promoter
    Flanking Genome Sequence: 11-3728-1 - 3-prime edge
    CATCACTGAT TTGCTATTTT TCGGTATATA TATATATATA AAANGGCATT 
    TCGTGTGAGT ATTGATAATA TGAGTTTAGT ANATTAGTCT AATAATCGTA
    TAAAAGTTAT TCTTCAATCC ATCACANTGC TAATTATTCA AAACATATTC
    GTATCATAAA GAAGTCACAC NAAANGGCTT GTTGAGCTGT ATTANAANAC
    CCTTAACAGG CCTCCATATC ACACTAAGAN GGGCTGAAAT TCACTAGTCT
    TAANTGGATC

AT2G01800.1

Model type
Protein coding
Short Description
COP1-interacting protein-related
Computational Description
COP1-interacting protein-related; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT4G00580.1); Has 777 Blast hits to 692 proteins in 155 species: Archae - 4; Bacteria - 61; Metazoa - 249; Fungi - 76; Plants - 111; Viruses - 5; Other Eukaryotes - 271 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01800.2

Model type
Protein coding
Short Description
COP1-interacting protein-related
Computational Description
COP1-interacting protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT4G00580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01800.3

Model type
Protein coding
Short Description
COP1-interacting protein-related
Computational Description
COP1-interacting protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT4G00580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR