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11-3734-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24623428 [Map]; Strand: w
      • AT5G61210.1 - [+] show detail - soluble N-ethylmaleimide-sensitive factor adaptor protein 33
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-3734-1 - 5-prime edge
    GTTCTGAGTC GTCTCCGCGT TAAATCTTTT CCCTTTTTGA TCCTTTCTTC 
    CTTTCTTCTT CTTCTTCTTC GCATTGATTT GGTCCTCCTT CCTCTTCTAT
    TCTATTCATT AAGAACCTAA TCTTCATCTT CTCCATCTTC TTCTTCACGG
    ACTCCACTTC GCTCATCCAG GTAACCACAA TCTGCTCTCT ATCTTTTGCT
    TCAAAATTCT CAGTTCCTTT CTTCTCAATT TCCGTCTGCT AGATCCTGGG
    CTTTCGATTT GTTCCGTTCC TCTTCTGCGA TTGTTTCGTT CCAGAGAGAA
    TTATCGAAAT AATTAAGCGA ATTTTGTGTG TGGTTTTCAT AGTCTTGGGT
    TCTTTAGCCG CTACATATAC TCAATTATGC CCAAAATTAG GTTTAAAATT
    GATTAACTAA AACTTATACT TTTTGGTCTC GTCTTATGTT ATCGTTTAAA
    TTGTTCTTAG AAGTGAAATC ATTCGATGCT ACGTTTTTGA CTTGTTGCTT
    TACTTTATCT ATACCTTTGA TTTGATCAAC TTTTCTCTTA NCTTACAAGT
    TANAATCAAA GCATNAATCC TGATTACTGN NNNGGNTNCT GCAGGAAGGG
    NNATTANTNG NAACCAANCC NAGGGGNNNC NTTTGTTNGA ANCAACAANC
    TANNNNCCNG NCCGNCNNC

AT5G61210.1

Model type
Protein coding
Short Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33
Curator Summary
membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation
Computational Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR