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11-3817-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12121310 [Map]; Strand: w
      • AT4G23140.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
        Distance: -73; Region: promoter
      • AT4G23140.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
        Distance: -73; Region: promoter
    Flanking Genome Sequence: 11-3817-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA CAACCCATCT TATACTACAC GCTAGTGATC 
    AGCTTATAAA TGGGAGCTCT NTGAGGTGAA ACNNAAANNA NGGTACTNAA 
    NCNANGTCTT CNNGTATANC GTNNAACTNA CNNTTCNNTT NNNGATNNCN 
    CACTANCNCN TTCACANCTG GNGATGAANA NCCTNATNGG GTANATGAAN 
    TATNGTGCAA AAGACGACAA ATTACTTCTC AAGTAACANC ATNTACTTGA 
    CCAATCTNAA AACCCTTTNG TNCTCTNTAT CTNNACGNAA CGCCTCTTNC 
    TCCACCAGGA TTNNNNANCG CCACGGCNGG AAAAGCCCCC GACAGAGTCA 
    CCGGACTTTT CCTTTGCCGG GGAGACGTCT CACCGGAAGT TTGCCGTAAC 
    TGCATAGCCT TTTCTGTCAA TCAAACCCTA AATCTTTGTC CCAAGGCGAG 
    AGAAGCCGTG TTTTACTACG AGGAATGCAT TCTCAGATAC TCTCACAAGA 
    ATATTCTAGC GACCCTTATA TACGAAGGAG GATTAATCAT GCAGAACACC 
    AATAATATTT CTTCAAATCA AAAACAAATA GACGGGTTCA CAAGTTTTGT 
    TTCCTCCACG ATGAGTGAAG CTGCCGGTAA AGCAGCCAAC AGTTCTAGAA 
    AATTATATAC GGNGAATACC GAATTGACCG CATACCAGAA TTTGTACGGG 
    CTGCTTCAGT GCACTCCTGA TCTTACAAGA CCAGACTGCT TGAGTTGTTG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12121310 [Map]; Strand: w
      • AT4G23140.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
        Distance: -73; Region: promoter
      • AT4G23140.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
        Distance: -73; Region: promoter
    Flanking Genome Sequence: 11-3817-1 - 3-prime edge 
    NTTTAAAACG GTNGAGGTAT TTTACNGACC GTTACCGACC GTTTTCATCC 
    CTTGACTATA AGAGTCAACA AGTCAAAGTA AATGATTCTT TTTCTTATTA 
    TTGTCATTTC TCTTAAACAA CATATATTTT TATTTGGGAA AAGCCCACGT 
    TAAAATTAAC TTGAATTTGA ATCAAAATTT AGTTATTTGA TCAGTGATCC 
    ACATATCACT AGTTGAGCCC AATAATGAGT GTATAAACGG GAGCTCCTTA 
    AAAGTTGGGA ACCACTAGCC TACTACAACT TGGTATTAGA AACAAAAGGA 
    ATT

AT4G23140.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Curator Summary
Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (CRK6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23140.2

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Curator Summary
Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (CRK6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 119608 Blast hits to 118061 proteins in 4543 species: Archae - 108; Bacteria - 13357; Metazoa - 44377; Fungi - 10093; Plants - 34036; Viruses - 376; Other Eukaryotes - 17261 (source: NCBI BLink).
Link
InterPro Scan - TAIR