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11-3827-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1244465 [Map]; Strand: c
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: -482; Region: promoter
    Flanking Genome Sequence: 11-3827-1 - 5-prime edge 
    GAAAGAGGAC AAGTGATTAA TCACCGAGTA TCTAGAACTT CTTTTTTTCT 
    CTTTTATCTT AATAACGAAG GCGTTGTTAA TATCCGGAAT TGTTTGTAAC 
    GAAATTTAGT TGTATGAAAA AACGAAAAAA AAAANCAGTN GCNTNCTNTN 
    GCTTCNNGGN CCTNTNTGGG GTNGGCCCCA AAANGGAANC CCNCNTNTNA 
    CAAACNTGTN GGNCGNANCC NCNNGGNNGT TTTNACNTTN GTTTNTAAAA 
    AGTAAAAACA ACCCGANANT TNNCANGTTT TTTTTTTTTT NNNAAAANNN 
    AAAAAAANTT TTTTNAAAAA AAAAANNNNN CCCNNCCCNN AGGGGGNNAN 
    CCCNAAANTT NGNCCNCCCN GGNCCCCCNA NNTTTTNANN ANGGGNTTTT 
    TNNNNNNNTN CCCNAAANNN NAGGGGGNTN AAAAAATTTN CGGGGNAANN 
    NNNNANNCCC TTTTTTTTTT TTTCCNGGGG NNGNAAGGGG NTCCNNNNNT 
    TTNNGNCNNN GGGGGGGNTT TANNCNAAAA AANAAAANTT TTTTTTNNAA 
    ANNTNNAAGG GGCAAAANTT TTTNNAATTT TAAAAAANTN NGGGCCTTTT 
    NNAAANATTT TTNGGGGGAA AAAAAAACCC CCCCGGGTTT NNNAAAAACC 
    CNGGGGGNNG GNNNNNNCNN TTTCCNNNTT NNCCNTTTTT NNAANGGGNG 
    GNGGGAAAAN

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR