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11-3861-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1211350 [Map]; Strand: c
      • AT1G04457.1 - [+] show detail
        Distance: -801; Region: promoter
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 11-3861-1 - 3-prime edge 
    ATTAAAACGG NAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGT 
    CTCGCATGTC ACGATGCTAA AGTCTTCCAT AAGTTGTTCT GTTGGTTGGC 
    CCATAAGCTG AATCACTCCT TCAACTGTCT CTGCCTCTCT ATCCACCACT 
    TCCTCTGGGA TTAGTCCTTC GCCGCAAGTG CAATAAACCT TCTTCAAACT 
    CTCGAAATCT TCCTCGATCA AATCGTGATC TGTTCGACAG AAAACTCGGG 
    AATGTCCTCC CGCGAGAAGA ACCGTCAAAA CGACTTCGAA TGAAGCCTTC 
    ATGACTTCTT TCATCGCCAA TGCTTGCGCT TTGTCCGCAA GAATCGCGGT 
    CATTAACGTT AAGTTCTGTT TCAAGATTCG CAACGCGGGT TTGATCCTCC 
    CGTTCGCGAC ATCTCCGGTG TATAGGCTTT CGTAGAATAC AGAGTATGAG 
    TCTAGGAAGA TTAACCGGTA AGCTGCAACC TCAGAGACAT GTTGGCATGC 
    AGATTCGATT CCTGCTTGAG TGAATT

AT1G04457.1

Model type
Pseudogene
Curator Summary
Pseudogene of AT2G33450; 50S ribosomal protein L28, chloroplast (CL28)
Link
InterPro Scan - TAIR

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR