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Mutant Lines
11-3898-1

11-3898-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 3; Position: 1575390 [Map]; Strand: w
- AT3G05450.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BES...
  Distance: 0; Region: intron4 (CDS)

CTAATAACTT AGTCTGGCTA AACAAGTCCT TATGAAATTC TTCAACTACT 
CTCTTCCATC ACATCGTCTA CTTCTTTCGA TTGATATCCT CGGCTACCTC 
TTTCAATTCA TCTCCTCGTC TACCTTCAAG TAGCACATTG ACCCGAAAAA 
AACAGCAAAA GATGGGATAA GTCTTTTTGT CAAACGATAT CGCATTTCTC 
ATCGATGATG ATTATGGCAT AAGATGGGAT AAGTCTTGTC GGCTGCAGAC 
CATGCGGCCT TAGCTTGATA CTCCTCTAAA GGTGCATCTG GAGAATCAGA 
CTCTCTTGCA GCAAATGTAA TGTAAAACTT GGACATGGAG CCAGGGTTGT 
AATTCGCCCT CAAGATATGT TCCAACTTCA CATTCAATCC CTAAAACAAC 
AAGACATAAT TGATTTAGAT ATACACACAT AATTAGGAAT CTAATAGCCA 
TAATTAAAAC CAACTTAAAA GTGAACAACT TACCACTTCT TGGTTATACT 
TGTTGAGACA TGAAGATGTC AAGTTAGCGC AGAATT

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 8753092 [Map]; Strand: c
  - AT3G24200.2 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
    Distance: -1723; Region: intergenic
  - AT3G24210.1 - [+] show detail - Ankyrin repeat family protein
    Distance: 382; Region: intergenic
Flanking Genome Sequence: 11-3898-1 - 3-prime edge
```
GTTATTAGGA ACTTGCACTA TTTGTCTACA CTAAAGAAGA CTGTGTATCT 
GTTGGAAATT GATTCTATAC TTAATCGTAT TTGAGATGAG ATCAAGAGAA 
GAGTGGAGAA AATGAGAGAC TCCAACAAAG AGAGAAGAAG AGATGTACAA 
GAGGAAGAGA CAAAGAGAAA GCT
```

AT3G05450.1

Model type: Protein coding
Computational Description: CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT3G05685.1); Has 2098 Blast hits to 1525 proteins in 202 species: Archae - 2; Bacteria - 561; Metazoa - 485; Fungi - 302; Plants - 191; Viruses - 20; Other Eukaryotes - 537 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G24200.2

Model type: Protein coding
Short Description: FAD/NAD(P)-binding oxidoreductase family protein
Computational Description: FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: FAD binding, monooxygenase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; INVOLVED IN: oxidation reduction, ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 (InterPro:IPR010971), Monooxygenase, FAD-binding (InterPro:IPR002938), Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site (InterPro:IPR018168); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G24210.1

Model type: Protein coding
Short Description: Ankyrin repeat family protein
Computational Description: Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G04780.1); Has 792 Blast hits to 708 proteins in 90 species: Archae - 0; Bacteria - 2; Metazoa - 393; Fungi - 3; Plants - 340; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Link: InterPro Scan - TAIR