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11-3916-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19648761 [Map]; Strand: w
      • AT2G48030.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-3916-1 - 5-prime edge
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAGG TACCTTTCTT ATAATCAGAA TGCTTACAAC
    ATGCAAGAAC AACAAAAACT TACTAATACC ACCACCTTTT TCTATGTCTG
    CCACCAATTT GATAAAATAA AATAAAAAAC ATTTAATTAT TGTGAATTTG
    GTAGGAAATT TTTATTAAAA AAAAAANCCC TANAGTTTTC NCAAAANCCC
    CNNGANANNT TTNTTTNTAN ANATNCTAAT AATAATTCAA ANACAAANGT
    ANGTCCAATN TNGNCGTTNG AAGCNGNCNN TAAAAATNTN CAGNNGNTNT
    NTNTNCATGT TNGGGCGTNN GGGTTNGNNT GGGTNTGNNC NCNCNTTNGA
    NGCTNTNNCN AAACNACCNN GACNACTNGG NTNTNAAAGG GNNCAAAGNC
    NCCGCNTCCN TTTNATGGNT GGATNCCTTT AANAAANGGA ACATNCNGNN
    TNCTNTNTGG ANNANCCNCA NTTNGNNTCC TNAAGTTGGN GGGTTTNAGT
    GGGTANCCCT ANTTNTAAAT ANGGGNAATA NCTTAAACCA GGAAAANNAA
    AACCNGNCCN GAANNCAGGG GGGCCGAANA TTNTNAAANC ATGGGNGCTT
    TTGANGGGCC CCTNAAANAN AANGGGGTGG CCGTACTCCG GGGCCCAGCT
    TTGGGGGAAN ACGTATTTNN TCCCNANCNC CNAANNNANA TCGGAAAGNG
    GNCTCNTTTG GNNAGCCTNG NCCGCCTTGA CGTTTG

AT2G48030.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G21530.1); Has 404 Blast hits to 404 proteins in 167 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR