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Mutant Lines
11-3955-1

11-3955-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 2264788 [Map]; Strand: c
  - AT1G07370.1 - [+] show detail - proliferating cellular nuclear antigen 1
    Distance: 237; Region: intergenic
  - AT1G07380.1 - [+] show detail - Neutral/alkaline non-lysosomal ceramidase
    Distance: 41; Region: intergenic
Flanking Genome Sequence: 11-3955-1 - 3-prime edge
```
ATTTGTGTAG TACATGCAAG TGCACAAGAC AGTGCATCAG GTAAACCTAG 
TATAATACAA GTTTACTATG TATCTACTTT GGTTTCTACT TGTTTATGTT 
ACAACGAAAG CACTAGAAGA GCCTGTGAAA TGATGGACTG ACCCAAAAAG 
CT
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 2264672 [Map]; Strand: c
- AT1G07370.1 - [+] show detail - proliferating cellular nuclear antigen 1
  Distance: 121; Region: intergenic
- AT1G07380.1 - [+] show detail - Neutral/alkaline non-lysosomal ceramidase
  Distance: 157; Region: intergenic

ACACAAATGT AGCCAGAGAG TACAGAATGG TGTCAAAGAA CTGATGTTGA 
GAAGTCTAAT GGAATCCAAT ATACCTTTTC ATGTCAATGT TCACATACAG 
TTTAAGTATC CAGGTATAGG CAACTACGGT TGTGTTAGTG TATAAATTAT 
CTTGCAAAGT GGAGTTAGTT TGTTGATGAA TGGTCATAGT TTCAAGACAA 
CTAATTTTGC TGAACTTTGT TATCATAAAA CATAATAAGT CAAGAAAACA 
ACTGATTCTA GAGGGGGGAT ACAAAGGAAT CTCACCAAAA AAAACACCAA 
CATTGTCAAT AAATCTTCAA CATTTTANAA TGAANAGAAA TTGTGGATAT 
AAAAGGGGTC TTAGGGATTA GTGTCTTCTT CTTCTTCAAT CTTAGGAGCC 
AAGTAGTAAC GAATGTAACC CATCTCAGCA ACCTTATACT CCACAACCAC 
TGGCAACTCC GACGATAAGC TGATTGTCAC TGTGTCTGAC AATGGAGTTG 
CCTTTGTGAA GGAATT

AT1G07370.1

Model type: Protein coding
Short Description: proliferating cellular nuclear antigen 1
Curator Summary: Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.
Computational Description: proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G07380.1

Model type: Protein coding
Short Description: Neutral/alkaline non-lysosomal ceramidase
Computational Description: Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT5G58980.1); Has 713 Blast hits to 570 proteins in 199 species: Archae - 0; Bacteria - 295; Metazoa - 184; Fungi - 101; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
Link: InterPro Scan - TAIR