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Mutant Lines
11-3961-1

11-3961-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 136219 [Map]; Strand: w
- AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
  Distance: 0; Region: exon4 (CDS)
- AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
  Distance: 0; Region: exon4 (CDS)
- AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
  Distance: 0; Region: intron3 (CDS)

TGCAAAATAC AAACAACAAT ACCATGCAAC AGAAAACCAG CTTGACCGAA 
GTAAGTCACA GCTTCTCAGC GTCATTAGCT CGGGAAACTG AGCTGCGAGG 
TCCAAGACCT GTATTGCAAC ATAGGCAATA GTCAGGAGGA GGAGCCTAAT 
ATTAACAACA GACTCAAACA AGTTCCCAAT TTTTTTGTGA GTTAGAATGT 
GGTCTAGTTT GTTGACTAAA ACAAATAGAA AAGAATGTGG TTTAGTTTAA 
GTTGACGATG ACCAGTCCCT GAGCAGATTG AACATTTCTG ATTAGTTGAT 
AGCCATCAGT TGAAGGTTAG AAACAACAAA GGCCATTTCT GAGCATTAGT 
TTTTAAATTT GAAGTTACCT GGTATGATAT AAGAGCATAA AAGATGATAA 
TAATATATAT CATCATCTTA GTATATAGTA TCTACACCAT GCTTTCGGTT 
CTAGTAGAGA AATGAACGCA CAAACCTTAT CAGCAAAAGG TTCACGGATG 
TATGGAAGGT CTCTTTCAAG ATACTCAAAC ATCAAACGAC CTTGAGAGCC 
TAAAGGTTCG CCATCATCAC TGGAAGAGTC TTCCTGATGT TGATCCCTCA 
ATGAGATACA GTCTACTCTA GCAGAAACCC GCTCGGAATC ACTATCGCTG 
CTAACATCGC TACTTGAATC CCGGAAATCA CTGTCGCTAC TATCACCAGG 
ACGCCTGC

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 136103 [Map]; Strand: w
  - AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
    Distance: 0; Region: intron4 (CDS)
  - AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
    Distance: 0; Region: intron4 (CDS)
  - AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
    Distance: 0; Region: intron3 (CDS)
Flanking Genome Sequence: 11-3961-1 - 3-prime edge
```
ATTTTGCATG CACTTGCTTG CTGCAATATG TTGTTCATGT CTCTAAAAAT 
TCATGTGATA CTTTGCAGGT ACCCAATTTA CAGAATACCC ACAGGACCGA 
CACTGAAGGA CCTGGATGCT TGTTTCTTGA CGTATCATTC CCTACACACA 
TCTTTTGGAG GTAAACCAAA ACTCTTTTAT TTATCAAAAC AACAAGTTGT 
AGGTTTACAC TGTTCCACAA CTTACACTAT ATCTAATCAG AATACTTGAG 
TGGATC
```

AT2G01260.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF789)
Computational Description: Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01260.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF789)
Computational Description: Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01260.3

Model type: Protein coding
Short Description: Protein of unknown function (DUF789)
Computational Description: Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR